Job Description P77400 Confidence 1.37% Date Thu Jan 5 12:28:55 GMT 2012 Rank 50 Aligned Residues 254 % Identity 11% Template c2nq2A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:hypothetical abc transporter permease protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter. Resolution 2.40 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.											.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	E	V	I	L	V	G	I	K	M	M	I	L	L	L	L	I	I	A	G	V	W	S	L	Q	P	A	H	I	S	V	S	A	P	P	S	S	G	A	F	F	S	C	I	G	I	T	F	.	.	.	.	.	.	.	.	.	.	L	A	Y	A	G	F	G	M	M	A	N	A	A	D	K	V	K	D	P	Q	V
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	P	R	I	L	T	A	L	C	V	G	A	G	L	A	L	S	G	V	V	L	Q	G	I	F	R	N	P	L	V	N	P	H	I	I	G	V	T	S	G	S	A	F	G	G	T	L	A	I	F	F	G	F	S	L	Y	G	L	F	T	S	T	I	L	F	G	F	G	T	L	A	L	V	F	L	F	S	F	K
Template Known Secondary structure																											T	T		T	T			T	T	T	T	S															T	T																										T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	P	R	A	F	L	V	A	I	G	V	T	T	L	L	Y	I	S	L	A	L	V	L	L	S	D	V	S	A	L	E	L	E	K	Y	A	D	T	A	V	A	Q	A	A	S	P	L	L	G	H	V	G	Y	V	I	V	V	I	G	A	L	L	A	T	A	S	A	I	N	A	N	L	F	A	V	F	N	I	M
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.
Template Sequence		S	L	L	M	L	I	L	I	G	M	I	L	S	G	L	F	S	A	L	V	S	L	L	Q	Y	I	S	D	T	E	E	.	.	.	.	.	.	.	K	L	P	S	I	V	F	W	L	M	G	S	F	A	T	S	N	W	E	K	L	L	F	F	F	V	P	F	L	L	C	S	S	I	L	L	S	L	S	W	R	L
Template Known Secondary structure																											S	S		T	T	T	.	.	.	.	.	.	.									T	T			S	T	T																							T	T	T	G	G
Template Predicted Secondary structure																																	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.								.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	M	G	S	E	R	E	L	P	K	L	M	N	K	S	L	W	R	Q	S	T	W	G	N	I	I	V	V	V	L	I	M	L	M	T	A	A	L	N	L	G	S	L	A	S	V	A	S	A	T	F	L	I	C	Y	L	A	V	F	V	V	A	I	R	L	R	H	D	I	H	A	S	L	P	I	L	I	V	G
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	L	S	L	D	E	K	E	A	K	A	L	G	V	K	M	A	P	L	R	W	L	V	I	F	L	S	G	S	L	V	A	C	Q	V	A	I	S	G	S	I	G	W	V	G	L	.	.	.	.	.	.	.	.	.	.	.	.	I	I	P	H	L	S	R	M	L	V	G	A	N	H	Q	S	L	L	P	C	T
Template Known Secondary structure		G	G	G	G	S								T	T																														S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.												S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.													.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	V	M	L	L	V	I	V	G	F	I	Y	S	L	W	S	Q	G	S	R	A	L	I	W	I	I	G	S	L	L	L	S	L	I	V	A	M	V	M	K	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	V	G	A	T	Y	M	L	L	V	D	N	V	A	R	S	L	S	D	A	E	I	P	I	S	I	L	T	A	L	I	G	A	P	L	F	G	V	L	V	Y	K
Template Known Secondary structure																			S		S	S
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions