Return to main results Retrieve Phyre Job Id

Job DescriptionP77400
Confidence0.94%DateThu Jan 5 12:28:55 GMT 2012
Rank91Aligned Residues28
% Identity18%Templatec1ceuA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:protein (hiv-1 regulatory protein n-terminal PDBTitle: nmr structure of the (1-51) n-terminal domain of the hiv-12 regulatory protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   208.210.........220 .........230.....
Predicted Secondary structure 
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Query Sequence  GFGMMANAADKVK. DPQVIMPRAFLVAIG
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Template Sequence  YNDWTLELLEELKNEAVRHFPRIWLHSLG
Template Known Secondary structure  TSTTTS
Template Predicted Secondary structure 

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   15....20.........30.........40...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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