Job Description P0AD14 Confidence 28.48% Date Thu Jan 5 11:19:40 GMT 2012 Rank 110 Aligned Residues 185 % Identity 15% Template c3mf0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cgmp-specific 3',5'-cyclic phosphodiesterase; PDBTitle: crystal structure of pde5a gaf domain (89-518) Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250				.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.
Query SS confidence																																																																								.	.	.
Query Sequence		V	T	N	T	V	G	A	A	L	F	M	R	I	L	L	D	K	R	A	M	F	E	K	Y	T	S	A	F	S	A	T	A	L	K	V	A	A	S	T	E	G	I	L	R	Q	G	F	N	E	V	N	S	M	K	V	A	Q	V	L	Y	Q	E	L	D	I	G	A	V	A	I	.	.	.	T	D	R	E	K	L	L
Query Conservation																																																																								.	.	.
Alig confidence																																																																								.	.	.
Template Conservation
Template Sequence		E	K	D	F	A	A	Y	L	A	F	C	G	I	V	L	H	N	A	Q	L	Y	E	T	S	L	L	E	N	K	R	N	Q	V	L	L	D	L	A	S	L	I	F	E	E	Q	Q	S	L	E	V	I	L	K	K	I	A	A	T	I	I	S	F	M	Q	V	Q	K	C	T	I	F	I	V	D	E	D	C	S	D	S
Template Known Secondary structure																																												T	T	T	T																		T		S									S	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.							330
Predicted Secondary structure																																																															.												.	.	.	.	.	.
Query SS confidence																																																															.												.	.	.	.	.	.
Query Sequence		A	F	T	G	I	G	D	D	H	H	L	P	G	K	P	I	S	S	T	Y	T	L	K	A	I	E	T	G	E	V	V	Y	A	D	G	N	E	V	P	Y	R	C	S	L	H	P	Q	C	K	L	G	S	T	L	V	I	P	L	R	G	E	.	N	Q	R	V	M	G	T	I	K	L	Y	.	.	.	.	.	.	E
Query Conservation																																																															.												.	.	.	.	.	.
Alig confidence																																									.	.	.																				.												.	.	.	.	.	.
Template Conservation																																									.	.	.
Template Sequence		F	S	S	V	F	H	M	E	C	E	E	L	E	K	S	I	N	Y	M	Y	A	Q	Y	V	K	N	T	M	E	P	L	N	I	P	D	V	S	K	D	.	.	.	K	R	F	P	W	Q	C	I	R	S	L	L	C	T	P	I	K	N	G	K	K	N	K	V	I	G	V	C	Q	L	V	N	K	M	E	E	N	T
Template Known Secondary structure										T	T	T	B						T											S					S		S	T	T		.	.	.	T	T	S																S	S	S															T	T	T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.				.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	N	R	L	F	S	S	I	N	R	T	L	G	E	G	I	A	Q	L	L	S	A	Q	I	L	A	G	Q	Y	E	R	Q	K	A	M	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	V	K	P	F	N	R	N	D	E	Q	F	L	E	A	F	V	I	F	C	G	L	G	I	Q	N	T	Q	M	Y	E	A	V	E	R	A	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions