Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD14
Confidence59.43%DateThu Jan 5 11:19:40 GMT 2012
Rank89Aligned Residues173
% Identity14%Templatec3ibjB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:cgmp-dependent 3',5'-cyclic phosphodiesterase; PDBTitle: x-ray structure of pde2a
Resolution3.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   230.........240.........250. ........260.........270.........280.........290......... 300...
Predicted Secondary structure 



....














..


Query SS confidence 





















. . . .















































. .



Query Sequence  VNSMKVAQVLYQELDIGAVAIT. . . . DREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRC. . SLHP
Query Conservation           
          
 ....                                                ..    
Alig confidence 





















....















































..



Template Conservation   

  

  
  

 


  
 
 
 
   
               

  

 
 
   
  
 
 
   

    
   
Template Sequence  SLQLKVLQYLQQETRASRCCLLLVSEDNLQLSCKVIGDKVLGEEVSFPLTGCLGQVVEDKKSIQLKDLTSEDVQQLQSML
Template Known Secondary structure  TT

TTSSTT

STTTT


TTS

S
Template Predicted Secondary structure 


































Template SS confidence 















































































   244.....250.........260.........270.........280.........290.........300.........310.........320...
 
   304.....310..... ....320.........330.........340.........350.........360.........370.........380.
Predicted Secondary structure 



..














Query SS confidence 











. .

































































Query Sequence  QCKLGSTLVIPL. . RGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNP
Query Conservation             
..                           
   
                                  
Alig confidence 











..

































































Template Conservation       
 
 


     
 




 
 
      

  
  

   
     

 
  
              
      
Template Sequence  GCELQAMLCVPVISRATDQVVALACAFNKLEGDLFTDEDEHVIQHCFHYTSTVLTSTLAFQKEQKLKCECQALLQVAKNL
Template Known Secondary structure 
S

S

SSS
SSSS



TTT
Template Predicted Secondary structure 





























Template SS confidence 















































































   324.....330.........340.........350.........360.........370.........380.........390.........400...
 
   382.......390.........400..
Predicted Secondary structure 
Query SS confidence 




















Query Sequence  HFLFNALNTIKAVIRRDSEQA
Query Conservation 
 
   
  
   
    

 
Alig confidence 




















Template Conservation        
  

  
      
Template Sequence  FTHLDDVSVLLQEIITEARNL
Template Known Secondary structure  GGGTT
Template Predicted Secondary structure 


Template SS confidence 




















   404.....410.........420....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions