Job Description P0AD14 Confidence 86.85% Date Thu Jan 5 11:19:40 GMT 2012 Rank 76 Aligned Residues 135 % Identity 12% Template c3eeaB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:gaf domain/hd domain protein; PDBTitle: the crystal structure of the gaf domain/hd domain protein2 from geobacter sulfurreducens Resolution 1.80 Å

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		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260							.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																				.	.															.	.	.	.	.	.
Query SS confidence																				.	.															.	.	.	.	.	.
Query Sequence		E	V	N	S	M	K	V	A	Q	V	L	Y	Q	E	L	D	I	G	.	.	A	V	A	I	T	D	R	E	K	L	L	A	F	T	.	.	.	.	.	.	G	I	G	D	D	H	H	L	P	G	K	P	I	S	S	T	Y	T	L	K	A	I	E	T	G	E	V	V	Y	A	D	G	N	E	V	P	Y	R	C	S
Query Conservation																				.	.															.	.	.	.	.	.
Alig confidence																				.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	V	I	K	D	L	S	R	L	L	R	K	L	V	K	T	R	W	I	A	V	Y	F	F	D	R	D	F	A	P	A	R	S	T	G	L	P	A	S	F	L	P	V	F	R	E	M	P	L	A	P	D	K	I	P	L	L	K	S	M	L	R	K	R	Q	H	L	M	L	T	D	P	G	S	S	D	L	L	T
Template Known Secondary structure																S			S																		S			G	G	G									B		T	T	T											T						S		G	G	G		T	T	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		301	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		L	H	P	Q	C	K	.	.	L	G	S	T	L	V	I	P	L	R	G	E	N	Q	R	V	M	G	T	I	K	L	Y	E	A	K	N	R	L	F	S	S	I	N	R	T	L	G	E	G	I	A	Q	L	L	S	A	Q	I	L	A	G	Q	Y	E	R	Q
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		P	K	L	R	K	L	L	R	N	L	C	V	L	A	V	P	M	V	V	R	T	Q	V	I	G	A	V	F	M	A	R	T	R	D	N	P	P	F	S	D	A	E	T	A	I	I	R	D	L	V	S	H	A	A	L	V	V	S	H	M	Q	L	F	D	E
Template Known Secondary structure								T	T	T											T	T												T	T	S																													T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions