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Job DescriptionP0AD14
Confidence99.95%DateThu Jan 5 11:19:40 GMT 2012
Rank4Aligned Residues189
% Identity12%Templatec3d2rB_
PDB info PDB header:transferaseChain: B: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 4; PDBTitle: crystal structure of pyruvate dehydrogenase kinase isoform 4 in2 complex with adp
Resolution2.03 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   370.........380.........390.... .....400.........410.........420.
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Query Sequence  SEIKLLHAQVNPHFLFNALNTIKAV. . . . . . . . . . . . . . . . . . . . . . . . . . IRRDSEQASQLVQYLSTFFRKNLKRPS. .
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Template Sequence  QKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKACTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPSH
Template Known Secondary structure  TTT





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   110.........120.........130.........140.........150.........160.........170.........180.........
 
   422.......430.........440..... ....450.........460.........470.........480...
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Query Sequence  . . . . . EFVTLADEIEHVNAYLQIEKARFQ. . . . . . SRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHGTSQL. . . . . . .
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Template Sequence  IGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVEHQENQ
Template Known Secondary structure  BTTBS



SSSTTS


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   191........200.........210.........220.........230.........240.........250.........260.........270
 
   484.....490.........500.........510.... .....520.........530.........540......
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Query Sequence  LDTGRVAISARREGQHLMLEIEDNAGLYQPV. . . . . . . . . . . . . . . . . TNASGLGMNLVDKRLRERFGDDYGISVACEPD
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Template Sequence  PSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTPPLAGFGYGLPISRLYAKYFQG. . . DLNLYSLSG
Template Known Secondary structure  SS



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GGGTTGGGSTT

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   271........280.........290.........300.........310.........320.........330........ .340.......
 
   547..550...... ...560.
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Query Sequence  SYTRITLRLP. WRDEA
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Template Sequence  YGTDAIIYLKALSSES
Template Known Secondary structure  TSSTTT
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   356...360.........370.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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