Job Description P0AD14 Confidence 99.93% Date Thu Jan 5 11:19:40 GMT 2012 Rank 8 Aligned Residues 314 % Identity 8% Template c3a0rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360) Resolution 3.80 Å

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		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.							.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																															.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.
Query Sequence		L	Y	Q	E	L	D	I	G	A	V	A	I	T	D	R	E	K	L	L	A	F	T	G	I	G	D	D	H	H	.	.	.	.	.	.	L	P	G	K	P	I	S	S	T	Y	T	L	K	A	I	E	T	G	E	V	V	Y	A	D	G	N	E	V	P	Y	R	C	S	L	H	P	Q	C	K	L	G	S	T	L	V
Query Conservation																															.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	E	S	L	E	T	A	I	I	T	L	S	K	D	G	R	I	T	E	W	N	K	K	A	E	Q	L	F	G	L	K	K	E	N	V	L	G	R	R	L	K	D	L	P	D	F	E	E	I	G	S	V	A	E	S	V	F	E	N	K	E	P	V	F	L	N	F	Y	K	F	G	E	R	Y	F	N	I	R	F
Template Known Secondary structure		S	G	G	G	S	S	S							S	S	S	B		S		B									S			S	T	T	T	T	T		B	S	T	T	S	T	T	T	T																							B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	L	R	G	E	N	Q	R	V	M	G	T	I	K	L	Y	E	A	K	N	R	L	F	S	S	I	N	R	T	L	G	E	G	I	A	Q	L	L	S	A	Q	I	L	A	G	Q	Y	E	R	Q	K	A	M	L	T	Q	S	E	I	K	L	L	H	A	Q	V	N	P	H	F	L	F	N	A	L	N	T	I	K
Query Conservation
Alig confidence																																																																						.
Template Conservation																																																																						.
Template Sequence		S	P	F	R	N	A	K	T	Q	L	L	E	G	V	I	I	T	I	D	D	V	T	E	L	Y	K	Y	E	E	E	R	K	R	R	E	R	L	S	I	L	G	E	M	T	A	R	V	A	H	E	I	R	N	P	I	T	I	I	G	G	F	I	M	R	M	K	K	H	.	L	D	D	P	E	T	L	K	K	Y	I
Template Known Secondary structure							T	T	T	T	S	S											S	T	T	T	T	T	T	T	T	T	T																																		T	T	S	.		S		S	S		T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.		.	.	.	570	.	.	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	R	R	D	S	E	Q	A	S	Q	L	V	Q	Y	L	S	T	F	F	R	K	N	L	K	R	P	S	E	F	V	T	L	A	D	E	I	E	H	V	N	A	Y	L	Q	I	E	K	A	R	F	Q	S	R	L	Q	V	N	I	A	I	P	Q	E	L	S	Q	Q	Q	L	P	A	F	T	L	Q	P	I	V
Query Conservation
Alig confidence																										.																														.	.
Template Conservation																										.																														.	.
Template Sequence		N	I	I	T	N	E	L	S	R	L	E	T	I	V	K	E	I	L	E	Y	S	K	E	R	.	V	L	E	F	T	E	F	N	L	N	E	L	I	R	E	V	Y	V	L	F	E	E	K	I	R	K	M	N	I	.	.	D	F	C	F	E	T	D	N	E	D	L	R	V	E	A	D	R	T	R	I	K	Q	V	L
Template Known Secondary structure																										.																									T	T	T	T		.	.							S		S
Template Predicted Secondary structure																										.																														.	.
Template SS confidence
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.		.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630			.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.								.	.	.	520	.	.	.	.	.	.	.	.	.	530		.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.															.
Query SS confidence																																														.	.	.	.	.	.	.															.
Query Sequence		E	N	A	I	K	H	G	T	S	Q	L	L	D	T	G	R	V	A	I	S	A	R	R	E	G	Q	H	L	M	L	E	I	E	D	N	A	G	L	Y	Q	P	V	T	N	.	.	.	.	.	.	.	A	S	G	L	G	M	N	L	V	D	K	R	L	R	.	E	R	F	G	D	D	Y	G	I	S	V	A	C	E
Query Conservation																																														.	.	.	.	.	.	.															.
Alig confidence																																														.	.	.	.	.	.	.															.					.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		I	N	L	V	Q	N	A	I	E	A	T	G	E	N	G	K	I	K	I	T	S	E	D	M	Y	T	K	V	R	V	S	V	W	N	S	G	P	P	I	P	E	E	L	K	E	K	I	F	S	P	F	F	T	T	L	G	L	S	I	C	R	K	I	I	E	D	E	H	G	G	.	.	.	K	I	W	T	E	N	R
Template Known Secondary structure						T					T	T		T	T											T	T										S					G	G	G	G	T	T	T	S	S	S								T									T	T		S	.	.	.	B
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.				.	.	.	.	730	.	.
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	S	Y	T	R	I	T	L	R	L	P	W	R	D	E
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	E	N	G	V	V	F	I	F	E	I	P	K	T	P	E
Template Known Secondary structure		.	S	S										S		T	T
Template Predicted Secondary structure		.
Template SS confidence
			739	740	.	.	.	.	.	.	.	.	.	750	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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