Job Description P0AD14 Confidence 99.32% Date Thu Jan 5 11:19:40 GMT 2012 Rank 28 Aligned Residues 92 % Identity 24% Template c2zbkB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms Resolution 3.56 Å

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		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.				.	.	490	.	.	.	.	.	.				.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.																				.	.	.	.
Predicted Secondary structure																									.	.	.										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Query SS confidence																									.	.	.										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Query Sequence		A	F	T	L	Q	P	I	V	E	N	A	I	K	H	G	T	S	Q	L	L	D	T	G	.	.	.	R	V	A	I	S	A	R	R	E	.	.	.	G	Q	H	L	M	L	E	I	E	D	N	A	G	L	Y	Q	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	A	S	.
Query Conservation																									.	.	.										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Alig confidence																									.	.	.										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation
Template Sequence		A	R	A	L	Y	Q	T	V	R	E	L	I	E	N	S	L	D	A	T	D	V	H	G	I	L	P	N	I	K	I	T	I	D	L	I	D	D	A	R	Q	I	Y	K	V	N	V	V	D	N	G	I	G	I	P	P	Q	E	V	P	N	A	F	G	R	V	L	Y	S	S	K	Y	V	N	R	Q	T	R	G	M	Y
Template Known Secondary structure																		T	T	T	T	T	T	T														T	T	T	T										S					G	G	G	S					T	S				S						S			S		S	S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.		.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		G	L	G	M	N	L	V	D	K	R	L	R	E	R	F	G	D	D	Y	G	I	S	V	A	C	E	P	.	D	S	Y	T	R	I	T	L	R	L	P	W	R
Query Conservation																													.
Alig confidence																			.	.									.
Template Conservation																			.	.
Template Sequence		G	L	G	V	K	A	A	V	L	Y	S	Q	M	H	Q	D	K	.	.	P	I	E	I	E	T	S	P	V	N	S	K	R	I	Y	T	F	K	L	K	I	D
Template Known Secondary structure		S	S																.	.									T	T		S
Template Predicted Secondary structure																			.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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