Job Description P0AD14 Confidence 99.25% Date Thu Jan 5 11:19:40 GMT 2012 Rank 30 Aligned Residues 98 % Identity 14% Template c2q2eB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei Resolution 4.00 Å

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		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.				.	.	490	.	.	.	.	.	.	.		.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.																			.	.	.
Predicted Secondary structure																													.	.	.											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	L	P	A	F	T	L	Q	P	I	V	E	N	A	I	K	H	G	T	S	Q	L	L	D	T	G	.	.	.	R	V	A	I	S	A	R	R	E	G	.	Q	H	L	M	L	E	I	E	D	N	A	G	L	Y	Q	P	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	S
Query Conservation																													.	.	.											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	S	A	P	R	S	L	I	T	T	V	K	E	A	V	D	N	A	L	D	A	C	E	E	A	G	I	L	P	D	I	L	V	Q	V	E	R	T	G	P	D	Y	V	T	V	I	I	E	D	N	G	P	G	I	V	R	E	Q	I	P	K	V	F	A	K	L	L	Y	G	F	H	A	L	K	S	R	G	Q	Q
Template Known Secondary structure			S	S																					T	T	T	S		S											T	T	T										S					G	G	G						S													S	S	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.		.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		G	L	G	M	N	L	V	D	K	R	L	R	E	R	F	G	D	D	Y	G	I	S	V	A	C	E	.	P	D	S	Y	T	R	I	T	L	R	L	P	W	R	D	E
Query Conservation																												.
Alig confidence																			.	.								.
Template Conservation																			.	.
Template Sequence		G	I	G	I	S	A	A	V	L	Y	A	Q	M	T	A	G	R	.	.	H	T	K	I	L	S	K	T	S	P	T	A	P	A	H	Y	Y	E	L	M	I	N	T	S
Template Known Secondary structure		S														T			.	.									S	S	S	S											S	S
Template Predicted Secondary structure																			.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions