Job Description P0AD14 Confidence 99.94% Date Thu Jan 5 11:19:40 GMT 2012 Rank 7 Aligned Residues 188 % Identity 10% Template c2bu8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.																												.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		E	I	K	L	L	H	A	Q	V	N	P	H	F	L	F	N	A	L	N	T	I	K	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	R	D	S	E	Q	A	S	Q	L	V	Q	Y	L	S	T	F	F	R	K	N	L	K	R	P	S	.	.
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation
Template Sequence		R	T	L	S	Q	F	T	D	A	L	V	T	I	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	L	E	Y	K	D	T	Y	G	D	D	P	V	S	N	Q	N	I	Q	Y	F	L	D	R	F	Y	L	S	R	I	S	I	R	M	L	I	N	Q	H	T	L	I	F	D	G	S	T	N	P	A	H	P	K
Template Known Secondary structure		T	T	T														T	T	T																																																			T	S	S	S		S	S		S		S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
								422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.						.	.	.	.	.	450	.	.	.	.	.		.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure		.	.	.	.	.	.																								.	.	.	.	.												.																												.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																								.	.	.	.	.												.																												.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	E	F	V	T	L	A	D	E	I	E	H	V	N	A	Y	L	Q	I	E	K	A	R	F	.	.	.	.	.	Q	S	R	L	Q	V	N	I	A	I	P	.	Q	E	L	S	Q	Q	Q	L	P	A	F	T	L	Q	P	I	V	E	N	A	I	K	H	G	T	S	Q	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.																								.	.	.	.	.												.																												.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																								.	.	.	.	.												.																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	I	G	S	I	D	P	N	C	N	V	S	E	V	V	K	D	A	Y	D	M	A	K	L	L	C	D	K	Y	Y	M	A	S	P	D	L	E	I	Q	E	I	N	A	A	N	S	K	Q	P	I	H	M	V	Y	V	P	S	H	L	Y	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	S	H	E	S
Template Known Secondary structure			B	T	T	B																										S												S	S	S	T	T	S																													T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.														.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	D	T	G	R	V	A	I	S	A	R	R	E	G	Q	H	L	M	L	E	I	E	D	N	A	G	L	Y	Q	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	A	S	G	L	G	M	N	L	V	D	K	R	L	R	E	R	F	G	D	D	Y	G	I	S	V	A	C	E	P	D	S	Y	T
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		S	L	I	L	P	P	I	K	V	M	V	A	L	G	E	E	D	L	S	I	K	M	S	D	R	G	G	G	V	P	L	R	K	I	E	R	L	F	S	Y	M	Y	S	T	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y	F	Q	G	.	.	.	D	L	Q	L	F	S	M	E	G	F	G	T
Template Known Secondary structure			S													S	S																			G	G	G	G		T	T	T	T						S	S													T	T		.	.	.								T	T
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.	.	330	.	.	.	.	.
		550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	T	L	R	L	P	W	R	D	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	V	I	Y	L	K	A	L	S	T	D
Template Known Secondary structure									S	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions