Job Description P0AD14 Confidence 99.95% Date Thu Jan 5 11:19:40 GMT 2012 Rank 5 Aligned Residues 188 % Identity 13% Template c1y8oA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; PDBTitle: crystal structure of the pdk3-l2 complex Resolution 2.48 Å

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		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.																												.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	I	K	L	L	H	A	Q	V	N	P	H	F	L	F	N	A	L	N	T	I	K	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	R	D	S	E	Q	A	S	Q	L	V	Q	Y	L	S	T	F	F	R	K	N	L	K	R	P	S	E
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	Q	V	L	D	N	F	L	Q	V	L	I	K	V	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	I	E	Y	K	E	K	F	G	F	D	P	F	I	S	T	N	I	Q	Y	F	L	D	R	F	Y	T	N	R	I	S	F	R	M	L	I	N	Q	H	T	L	L	F	G	G	D	T	N	P	V	H	P
Template Known Secondary structure																			G	G	G																																																				S			S	S		S	S	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
										423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.		.	440	.	.	.	.	.	.	.	.	.	450	.	.	.						.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																	.																.	.	.	.	.																															.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																	.																.	.	.	.	.																															.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	F	V	T	L	A	D	E	I	E	H	V	N	A	Y	L	Q	.	I	E	K	A	R	F	Q	S	R	L	Q	V	N	I	A	.	.	.	.	.	I	P	Q	E	L	S	Q	Q	Q	L	P	A	F	T	L	Q	P	I	V	E	N	A	I	K	H	G	T	S	Q	L	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.																	.																.	.	.	.	.																															.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																	.																.	.	.	.	.																															.	.	.	.	.
Template Conservation
Template Sequence		K	H	I	G	S	I	D	P	T	C	N	V	A	D	V	V	K	D	A	Y	E	T	A	K	M	L	C	E	Q	Y	Y	L	V	A	P	E	L	E	V	E	E	F	N	A	K	A	P	D	K	P	I	Q	V	V	Y	V	P	S	H	L	F	H	M	L	F	E	L	F	K	N	S	M	R	A	T	V	E	L	Y	E
Template Known Secondary structure		T	S	B	T	T	B																										S												T	T	S	T	T	S																															T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
					484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.											.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure		.	.	.																																.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	L	D	T	G	R	V	A	I	S	A	R	R	E	G	Q	H	L	M	L	E	I	E	D	N	A	G	L	Y	Q	P	V	.	.	.	.	.	.	.	.	.	.	T	N	A	S	G	L	G	M	N	L	V	D	K	R	L	R	E	R	F	G	D	D	Y	G	I	S	V	A	C	E	P	D	S	Y	T	R
Query Conservation		.	.	.																																.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		D	R	K	E	G	Y	P	A	V	K	T	L	V	T	L	G	K	E	D	L	S	I	K	I	S	D	L	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	P	L	F	G	Y	G	L	P	I	S	R	L	Y	A	R	Y	F	Q	G	.	.	.	D	L	K	L	Y	S	M	E	G	V	G	T	D
Template Known Secondary structure		T		S	S													S	S										S									G	G	G	G		T	T	T					T	T												T	T		.	.	.								T	T	T
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.
		551	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	L	R	L	P	W	R	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	I	Y	L	K	A	L	S	S
Template Known Secondary structure								S		G	G
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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