Job Description P0AD14 Confidence 97.69% Date Thu Jan 5 11:19:40 GMT 2012 Rank 43 Aligned Residues 85 % Identity 12% Template c1qzrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase ii; PDBTitle: crystal structure of the atpase region of saccharomyces cerevisiae2 topoisomerase ii bound to icrf-187 (dexrazoxane) Resolution 1.90 Å

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		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	L	P	A	F	T	L	Q	P	I	V	E	N	A	I	K	H	G	T	S	Q	L	L	D	T	G	R	V	A	I	S	A	R	R	E	G	Q	H	L	M	L	E	I	E	D	N	A	G	L	Y	Q	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.																.	.
Template Sequence		V	P	G	L	F	K	I	F	D	E	I	L	V	N	A	A	D	N	K	V	R	D	P	.	S	M	K	R	I	D	V	N	I	H	A	E	E	H	T	.	.	I	E	V	K	N	D	G	K	G	I	P	I	E	I	H	N	K	E	N	I	Y	I	P	E	M	I	F	G	H	L	L	T	S	S	N	Y	D	D	D
Template Known Secondary structure																								T	.	T										T	T	T	T		.	.							S	S					S	B		T	T	T		S	B								S	S	S			S				T	T
Template Predicted Secondary structure																									.																.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
							515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.		.	.	550	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																		.
Query SS confidence		.	.	.	.	.																																		.
Query Sequence		.	.	.	.	.	T	N	A	S	G	L	G	M	N	L	V	D	K	R	L	R	E	R	F	G	D	D	Y	G	I	S	V	A	C	E	P	D	S	.	Y	T	R	I	T	L	R	L
Query Conservation		.	.	.	.	.																																		.
Alig confidence		.	.	.	.	.																	.	.	.	.	.	.	.											.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		E	K	K	V	T	G	G	R	N	G	Y	G	A	K	L	C	N	I	F	S	T	.	.	.	.	.	.	.	E	F	I	L	E	T	A	D	L	N	V	G	Q	K	Y	V	Q	K	W
Template Known Secondary structure		S					S			S	S									T			.	.	.	.	.	.	.									T	T	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions