Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD14
Confidence65.62%DateThu Jan 5 11:19:40 GMT 2012
Rank87Aligned Residues186
% Identity10%Templatec1mc0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:3',5'-cyclic nucleotide phosphodiesterase 2a; PDBTitle: regulatory segment of mouse 3',5'-cyclic nucleotide phosphodiesterase2 2a, containing the gaf a and gaf b domains
Resolution2.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190.........200.........210.........220.........230.........240.........250.........260..
Predicted Secondary structure 









Query SS confidence 















































































Query Sequence  NTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGI
Query Conservation                                                          
          
            
Alig confidence 















































































Template Conservation                                                  
   
                           
Template Sequence  VIQHCFHYTGTVLTSTLAFQKEQKLKCECQALLQVAKNLFTHLDDVSVLLQEIITEARNLSNAEICSVFLLDQNELVAKV
Template Known Secondary structure  TTT
T
SSS
Template Predicted Secondary structure 
























Template SS confidence 















































































   358.360.........370.........380.........390.........400.........410.........420.........430.......
 
   263......270..... ....280.........290.........300... ......310.........320......... 330.
Predicted Secondary structure 




......








....









.
Query SS confidence 












. . . . . .



























. . . .

























.

Query Sequence  GDDHHLPGKPISS. . . . . . TYTLKAIETGEVVYADGNEVPYRCSLHP. . . . QCKLGSTLVIPLRGENQRVMGTIKLY. EA
Query Conservation               ......                            ....           
              .  
Alig confidence 












......



























....

























.

Template Conservation                                                          
 
 


    
  



 
    
Template Sequence  FDGGVVDDESYEIRIPADQGIAGHVATTGQILNIPDAYAHPLFYRGVDDSTGFRTRNILCFPIKNENQEVIGVAELVNKI
Template Known Secondary structure  TT


STT


TTS


S
STT
TT


TTT





TTS
T
Template Predicted Secondary structure 








































Template SS confidence 















































































   438.440.........450.........460.........470.........480.........490.........500.........510.......
 
   332.......340.........350.........360........
Predicted Secondary structure 





Query SS confidence 




































Query Sequence  KNRLFSSINRTLGEGIAQLLSAQILAGQYERQKAMLT
Query Conservation             
   
                     
Alig confidence 




































Template Conservation      
   
  

   
   
 

 

 

       
Template Sequence  NGPWFSKFDEDLATAFSIYCGISIAHSLLYKKVNEAQ
Template Known Secondary structure  TSSS

TT
Template Predicted Secondary structure 





Template SS confidence 




































   518.520.........530.........540.........550....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions