Job Description P0AD14 Confidence 99.94% Date Thu Jan 5 11:19:40 GMT 2012 Rank 6 Aligned Residues 209 % Identity 15% Template c1gjvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[3-methyl-2-oxobutanoate dehydrogenase PDBTitle: branched-chain alpha-ketoacid dehydrogenase kinase (bck)2 complxed with atp-gamma-s Resolution 2.7 Å

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		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.																								.	.	.	.	.	400	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	I	A	Q	L	L	S	A	Q	I	L	A	G	Q	Y	E	R	Q	K	A	M	L	T	Q	S	E	I	K	L	L	H	A	Q	V	N	P	H	F	L	F	N	A	L	N	T	I	K	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	R	D	S	E	Q
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	I	L	H	V	H	E	L	Y	I	R	A	F	Q	K	L	T	D	F	P	P	I	K	D	Q	A	D	E	A	Q	Y	C	Q	L	V	R	Q	L	L	D	D	H	K	D	V	V	T	L	L	A	E	G	L	R	E	S	R	K	H	I	E	D	E	K	L	V	R	Y	F	L	D	K	T	L	T	S	R	L	G
Template Known Secondary structure																				T	S					S																		T	T	T													T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.				.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.		.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.																														.
Query SS confidence																.	.	.																														.
Query Sequence		A	S	Q	L	V	Q	Y	L	S	T	F	F	R	K	.	.	.	N	L	K	R	P	S	E	F	V	T	L	A	D	E	I	E	H	V	N	A	Y	L	Q	I	E	K	A	R	F	.	Q	S	R	L	Q	V	N	I	A	I	P	Q	E	L	S	Q	Q	Q	L	P	A	F	T	L	Q	P	I	V	E	N	A	I	K
Query Conservation																.	.	.																														.
Alig confidence																.	.	.																														.																.
Template Conservation																																																																.
Template Sequence		I	R	M	L	A	T	H	H	L	A	L	H	E	D	K	P	D	F	V	G	I	I	C	T	R	L	S	P	K	K	I	I	E	K	W	V	D	F	A	R	R	L	C	E	H	K	Y	G	N	A	P	R	V	R	I	N	G	H	V	A	A	R	.	F	P	F	I	P	M	P	L	D	Y	I	L	P	E	L	L	K
Template Known Secondary structure												T	T	S			T	T			T	T																											S										S	T	T			.
Template Predicted Secondary structure																																																																.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		478	.	480	.	.	.									.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.												.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	G	T	S	Q	L	.	.	.	.	.	.	.	.	L	D	T	G	R	V	A	I	S	A	R	R	E	G	Q	H	L	M	L	E	I	E	D	N	A	G	L	Y	Q	P	V	.	.	.	.	.	.	.	.	.	.	.	T	N	A	S	G	L	G	M	N	L	V	D	K	R	L	R	E	R	F	G	D	D	Y	G
Query Conservation								.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																																																														.	.	.
Template Sequence		N	A	M	R	A	T	M	E	S	H	L	D	T	P	Y	N	V	P	D	V	V	I	T	I	A	N	N	D	V	D	L	I	I	R	I	S	D	R	G	G	G	I	A	H	K	D	L	D	R	V	M	D	Y	H	F	T	T	A	G	F	G	F	G	L	P	T	S	R	A	Y	A	E	Y	L	G	G	.	.	.	S
Template Known Secondary structure										T		T	T		T	T	S												S	S										S					G	G	G	T	T	T	T	T	S	T	T							S														T		.	.	.
Template Predicted Secondary structure																																																																														.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.				.
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	V	A	C	E	P	D	S	Y	T	R	I	T	L	R	L	P	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	L	Q	S	L	Q	G	I	G	T	D	V	Y	L	R	L	R	H
Template Known Secondary structure								T	T	T
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions