|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | P | Y | Q | R | Q | F | I | E | F | A | L | S | K | Q | V | L | K | F | . |
. |
. |
G | E | F | T | L | K | S | G | R | K | S | P | Y | F | F | N | A | G | L | F | N | . |
T | G | R | D | L | A | L | L | G | R | F | Y | A | E | A | L | V | D | S | G | I | E | F | D | L | L | F | G | P | A | Y | K | G | I | P |
Query Conservation |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |
|   | . | . | . |
|   |
|   |
|   |
|
|   |   |
|   |   |
|
|
|   |   |   |
|   | . |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|
|
|
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   | . |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |
Template Sequence |   |
M | T | L | . |
A | S | Q | I | A | T | Q | L | L | D | I | K | A | V | Y | L | K | P | E | D | P | F | T | W | A | S | G | I | K | S | P | I | Y | T | D | N | R | V | T | L | S | Y | P | K | T | R | D | L | I | E | N | G | F | V | E | T | I | K | A | H | F | P | E | V | E | V | I | A | G | T | A | T | A | G | I | P |
Template Known Secondary structure |   |
|
|  | . |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |
| T | T | S |
|  |  |
| G | G | G |
|  |  | S |  |  |  |
| G | G | G | G | G | G |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  | T | T | T | T |  |  |
Template Predicted Secondary structure |   |
|
|  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | |
. | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | T | T | T | A | V | A | L | A | E | H | H | D | L | D | L | P | Y | C | F | N | R | K | E | A | K | D | H | G | E | G | G | N | L | V | G | S | A | L | Q | G | R | V | M | L | V | D | D | V | I | T | A | G | T | A | I | R | E | S | M | E | I | I | Q | A | N | G | A | T | L | A | G | V | L | I | S | L | D | R |
Query Conservation |   |
  |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |
|   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |
|   |   | . | . | . | . | . | . |
|   |   |   |   |
|
|   |   |
|   |   |   |   |
|
|   |   | . | . | . |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|
|
Template Sequence |   |
H | G | A | I | I | A | D | K | M | T | L | . |
. |
. |
. |
. |
. |
P | F | A | Y | I | R | S | K | P | K | G | N | Q | I | E | G | R | V | . |
. |
. |
L | K | G | Q | K | M | V | I | I | E | D | L | I | S | T | G | G | S | V | L | D | A | A | A | A | A | S | R | E | G | A | D | V | L | G | V | V | A | I | F | T | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
| . | . | . | . | . | . |
|  |  |  |  |
| S | S |
|
|
|
| S |  |  | S |
|
| . | . | . |
| T | T |
|  |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
|
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
  |   |
157 | |
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | |
. | . | 200 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
| . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | . |
E | R | G | R | G | E | I | S | A | I | Q | E | V | E | R | D | Y | N | C | K | V | I | S | I | I | T | L | K | D | L | I | A | Y | L | E | E | K | P | E | M | . |
A | E | H | L | A | A | V | K | A | Y | R | E |
Query Conservation |   |
  | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   | . |   |
|   |   |   |   |
|   |   |
|   |   |
Alig confidence |   |
| . |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   | . | . | . | . | . | . | . |   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
Template Sequence |   |
E | L | P | K | A | . |
. |
. |
. |
. |
. |
. |
S | Q | N | F | K | E | A | G | I | K | L | I | T | L | S | N | Y | T | E | L | I | A | V | A | K | L | Q | G | Y | I | T | N | D | G | L | H | L | L | K | K | F | K | E |
Template Known Secondary structure |   |
|
|  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  | T |
|
|  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
155 | . | . | . | . | |
|
|
|
|
|
|
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
  |