|   |
22 | . | . | . | . | . | . | |
|
|
. | 30 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | |
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
|  |  |  |
|
|
| . | . | . |
|
|
|
|  |  | . | . | . | . | . | . | . |  |
|
| . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | F | T | L | K | S | G | . |
. |
. |
R | K | S | P | Y | F | . |
. |
. |
. |
. |
. |
. |
F | N | A | . |
G | L | F | N | T | G | R | D | L | A | L | L | G | R | F | Y | A | E | A | L | V | D | S | G | I | E | F | D | L | L | F | G | P | A | Y | K | G | I | P | I | A | T | T | T | A | V | A | L | A | E | H | H | D |
Query Conservation |   |
  |
|   |
|   |
|
| . | . | . |   |   |
|   |   |
| . | . | . | . | . | . | . |
|
|   | . |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   | . | . | . |   |   |
|   |
|
|   |
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|   | . | . | . |
Template Sequence |   |
T | Y | P | I | T | V | G | G | V | T | R | H | V | P | L | I | E | P | L | P | G | R | R | I | P | L | V | E | F | L | G | D | P | E | F | T | R | A | A | A | E | A | L | R | P | L | V | P | K | . |
. |
. |
E | A | E | I | L | F | T | T | E | T | S | P | I | P | L | T | H | V | L | A | E | A | L | G | L | . |
. |
. |
Template Known Secondary structure |   |
|  |  |  |  |  | T | T |  |  |  |  |  |
|  |  |  |  |  | T | T |  |  |  |  |
|
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  | G | G | G | S |
| T | . | . | . | T |
|
|  |  |  |  |  | S | S | T |  |  |  |  |  |  |  |  |  |  |  |  | T |
| . | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
|
  |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | L | P | Y | C | F | N | R | K | E | A | K | D | H | G | E | G | G | N | L | V | G | S | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | Q | G | R | V | M | L | V | D | D | V | I | T | A | G | T | A | I | R | E | S | M | E | I | I | Q | A | N | G | A | T | L | A | G | V | L | I | S | L | D | R |
Query Conservation |   |
  |   |   |
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |
|   |   |
|   |   |   |
Template Sequence |   |
. |
. |
. |
P | Y | V | V | A | R | R | R | R | R | P | Y | M | E | D | P | I | I | Q | E | V | Q | T | E | V | L | W | L | D | R | R | F | A | E | K | L | L | N | Q | R | V | V | L | V | S | D | V | V | A | S | G | E | T | M | R | A | M | E | K | M | V | L | R | A | G | G | H | V | V | A | R | L | A | V | F | R | Q |
Template Known Secondary structure |   |
. | . | . |
|  |  |  |  | B | S | S |
|
| T | T |
|
| S |
|  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
. | . | . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
  |
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | R | G | R | G | E | I | S | A | I | Q | E | V | E | R | D | Y | N | C | K | V | I | S | I | I | T | L |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
G | T | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | L | A | V | D | T | V | A | E | L |
Template Known Secondary structure |   |
S |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | S |
|
|  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 170 | . | . |
  |