 |
Job Description | P0A7E3 | Confidence | 39.98% | Date | Thu Jan 5 11:05:28 GMT 2012 |
Rank | 110 | Aligned Residues | 40 |
% Identity | 15% | Template | c2edzA_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:pdz domain-containing protein 1; |
PDBTitle: solution structures of the pdz domain of mus musculus pdz2 domain-containing protein 1
|
Resolution | UNK |
|
  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | S | A | L | Q | G | R | V | M | L | V | D | D | V | I | T | A | G | T | A | I | R | E | S | M | E | I | I | Q | A | N | G | A | T | L | A | G | V | L | I |
Query Conservation |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |
|   |
|   |
|   |
Template Sequence |   |
G | L | L | D | G | D | R | V | L | R | I | N | G | V | F | V | D | K | E | E | H | A | Q | V | V | E | L | V | R | K | S | G | N | S | V | T | L | L | V | L |
Template Known Secondary structure |   |
T |
|
| T | T |
|  |  |  |  |  | S | S | S | B |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|