Return to main results Retrieve Phyre Job Id

Job DescriptionP25907
Confidence5.39%DateThu Jan 5 11:42:46 GMT 2012
Rank89Aligned Residues84
% Identity18%Templatec3kboB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glyoxylate/hydroxypyruvate reductase a; PDBTitle: 2.14 angstrom crystal structure of putative oxidoreductase (ycdw) from2 salmonella typhimurium in complex with nadp
Resolution2.14 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   206...210.........220....... ..230.........240.........250.........260.........270.........280....
Predicted Secondary structure 




.



















Query SS confidence 





















.
























































Query Sequence  GLINDEDALKEIFKRSNIRMAG. NVCNQMKKEALFRPKPSPELVQELQMLDEGKVAAFEGRDIATFDLAVMRTLPRLKGI
Query Conservation 





















.
























































Alig confidence 





















.

.........







...................


















Template Conservation 
 



 

  

  
 
 

 


.........   



 ...................  

    






 

 
Template Sequence  GVHVQEADLLAALDSGKLKGAXLDV. . . . . . . . . FSQEPLPQ. . . . . . . . . . . . . . . . . . . ESPLWRHPRVAXTPHIAAV
Template Known Secondary structure  GGGB
TSS
.........
SSSS

T...................T
TTTT
TT
SS
S

Template Predicted Secondary structure 









.........







...................











Template SS confidence 















































































   228.230.........240.........250.. .......260 .........270.........
 
   285....290.........300.........310.........320...
Predicted Secondary structure 










Query SS confidence 






































Query Sequence  SANLRKQLINSNDEQTIESMARYMPDNEILELTDQQLGY
Query Conservation 






































Alig confidence 






......

























Template Conservation 
      ......    


     
  
 
 

   

Template Sequence  TRPAEAI. . . . . . DYISRTITQLEKGEPVTGQVDRARGY
Template Known Secondary structure 

......TT


S

TTTT
Template Predicted Secondary structure 
......











Template SS confidence 






































   280...... ...290.........300.........310..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions