Job Description P25907 Confidence 5.21% Date Thu Jan 5 11:42:46 GMT 2012 Rank 100 Aligned Residues 125 % Identity 21% Template c3ipiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase; PDBTitle: crystal structure of a geranyltranstransferase from the2 methanosarcina mazei Resolution 1.90 Å

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		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.			.	.	.	400	.	.	.	.	.	.	.	.	.	410	.						.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																					.	.																.	.	.	.	.
Query SS confidence																					.	.																.	.	.	.	.
Query Sequence		I	I	Q	E	L	Y	K	D	A	W	L	L	P	E	S	I	I	D	G	.	.	Y	I	R	S	D	D	S	S	I	R	Q	V	G	A	G	.	.	.	.	.	G	Q	L	T	Y	N	Q	A	M	Q	L	A	N	D	S	S	N	N	V	V	T	S	L	A	F	K	L	A	E	M	K	H	H	G	Q	L	L	R	M
Query Conservation																					.	.																.	.	.	.	.
Alig confidence																					.	.																.	.	.	.	.																															.
Template Conservation																																																																									.
Template Sequence		L	A	V	E	X	X	H	S	A	S	L	I	H	D	D	L	L	D	Q	G	L	V	R	R	N	L	P	S	A	P	E	K	F	G	P	S	G	A	L	L	C	G	D	Y	L	I	A	K	S	I	A	F	I	S	P	Y	G	E	K	V	I	Q	D	F	G	K	A	G	X	D	X	.	A	E	G	E	V	L	D	L
Template Known Secondary structure																						T	S		T	T	S						S	S																					G	G	G																.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500			.	.	.	.	.	.	.	.	.	510		.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.											.
Query SS confidence																																																				.	.											.
Query Sequence		T	P	Q	E	S	D	K	V	A	G	Y	L	Y	Q	K	F	E	N	D	D	D	L	I	R	V	L	F	L	A	L	P	D	N	L	Q	F	N	F	V	K	R	M	E	K	K	S	P	A	Y	F	.	.	C	C	R	D	M	Q	V	I	H	S	.	D	A	A	L	Q	R	L	L	T	R	F	N	D	P	E	G	W
Query Conservation																																																				.	.											.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.											.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	K	C	I	Y	K	K	T	A	S	L	F	A	I	S	A	S	I	G	A	Y	T	G	G	A	E	E	E	L	A	E	R	F	S	H	F	G	N	A	L	G	T
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T															T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.																																		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		528	.	530	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	L	A	K	N	Q	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	Q	I	V	D	D	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions