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Job DescriptionP25907
Confidence7.63%DateThu Jan 5 11:42:46 GMT 2012
Rank35Aligned Residues130
% Identity18%Templatec2w91A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endo-beta-n-acetylglucosaminidase d; PDBTitle: structure of a streptococcus pneumoniae family 85 glycoside2 hydrolase, endo-d.
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60.........70.........80.........90.........100.........110.........120.........130....
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Query Sequence  NSSVNLVPFGLSASNWKVHRGDLVVEGNIESNQKLIVLGNLTVKGNISTFSLSNPWVILGNVTATNIVADSPLLITGSIN
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Template Sequence  NEEFDLSSL. . . . AGKTIYAVKLFFEHEGAVKDYQFNLGQLTISDNHQEPQSPTSFSVVKQSLKNAQEAEAVVQFKGNKD
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   662.......670 .........680.........690.........700.........710.........720.........730.......
 
   135....140.........150.........160.........170.........180.........
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Query Sequence  ASGLVFIDSYYDNPSTIKGSINARGIFINDIIAPVVASSTNSEFMVRASDKHDTE
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Template Sequence  ADFYEVYEKDGDSWKLLTGSSSTT. IYLPKVSRSASAQGTTQELKVVAVGKNGVR
Template Known Secondary structure  TTSSS.

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B
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   738.740.........750.........760. ........770.........780.........790.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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