 |
Job Description | P25907 | Confidence | 7.81% | Date | Thu Jan 5 11:42:46 GMT 2012 |
Rank | 33 | Aligned Residues | 44 |
% Identity | 25% | Template | c2odlA_ |
PDB info |
PDB header:cell adhesion | Chain: A: PDB Molecule:adhesin; |
PDBTitle: crystal structure of the hmw1 secretion domain from2 haemophilus influenzae
|
Resolution | 1.92 Å |
|
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | |
|
|
|
. | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  | . | . | . | . |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | V | I | L | G | N | V | T | A | T | N | I | V | A | D | S | P | L | L | I | T | G | S | I | N | A | S | G | L | V | F | I | D | S | Y | Y | D | N | P | S | T | I | K | . |
. |
. |
. |
G | S | I | N | A | R | G | I | F | I |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
|   |
| . | . | . | . | . |
|
|   |
|   |
|   |
|   |   |   |
| . | . | . | . |
|
|   |
|   |
|
|
|
|
|
|
|
|   |   |
|   |
|
|   |
|   |   |   |   |
Template Sequence |   |
S | A | V | F | N | R | V | T | S | N | Q | . |
. |
. |
. |
. |
I | S | Q | L | K | G | I | L | D | S | N | G | . |
. |
. |
. |
Q | V | F | L | I | N | P | N | G | I | T | I | G | K | D | A | I | I | N | T | N | G | F | T | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
| S | S |
| . | . | . | . | . |
|  |  |  |
| S |  |  |  |  | S | S | . | . | . | . |  |  |  |  |  |
| T | T |
|  |  |  |
| T | T |
|  |  |  | S | S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
122 | . | . | . | . | . | . | . | 130 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 140 | . | . | . | . | |
|
|
|
. | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|