Job Description P25396 Confidence 2.23% Date Thu Jan 5 11:41:46 GMT 2012 Rank 52 Aligned Residues 174 % Identity 9% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	L	G	T	I	G	M	G	F	A	W	R	Y	A	S	Q	V	W	Q	V	S	H	W	L	G	D	G	L	V	I	L	A	M	I	I	W	G	L	L	T	S	A	F	I	A	R	L	I	R	F	P	H	S	V	L	A	E	V	R	H	P	V	L	S	S	F	V	S	L	F	P	A	T	T	M	L	V	A	I
Query Conservation
Alig confidence																																																							.	.													.	.	.	.	.	.
Template Conservation																																																							.	.													.	.	.	.	.	.
Template Sequence		S	M	L	G	S	M	V	L	W	L	F	W	P	S	F	A	T	A	I	V	P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	G	.	.	K	A	S	I	V	D	M	A	N	A	A	L	.	.	.	.	.	.	A	G	G	V	A	I	G
Template Known Secondary structure																			T	T	S		G	G	G																											T	T	T	.	.											T	T	.	.	.	.	.	.							T
Template Predicted Secondary structure																																																							.	.													.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.							.	270	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		G	F	V	P	W	F	R	P	L	A	V	C	L	F	S	F	G	V	V	V	Q	L	A	Y	A	A	W	Q	T	A	G	L	W	R	G	S	H	P	E	E	A	T	T	P	G	L	Y	L	P	.	.	.	.	T	V	A	N	N	F	I	S	A	M	A	C	G	A	L	G	Y	T	D	A	G	L	V	F	L	G	A
Query Conservation																																																			.	.	.	.
Alig confidence																																																			.	.	.	.																									.
Template Conservation																																																																															.
Template Sequence		S	V	C	N	I	V	G	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V	A	Q	L	T	G	I	G	I	.	T	L
Template Known Secondary structure		T	T	T	T	T	S																						T									S					T	T						T	T														S	T	T												.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	F	S	W	L	S	L	E	P	V	I	L	Q	R	L	R	S	S	G	E	L	P	T	A	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S
Template Known Secondary structure																	T	T				S	S	T	T		G	G
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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