Return to main results Retrieve Phyre Job Id

Job DescriptionP25396
Confidence2.66%DateThu Jan 5 11:41:46 GMT 2012
Rank37Aligned Residues9
% Identity0%Templatec1zecA_
PDB info PDB header:viral peptideChain: A: PDB Molecule:nef1-25; PDBTitle: nmr solution structure of nef1-25, 20 structures
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10..
Predicted Secondary structure 


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Query Sequence  DKVLNLPAG
Query Conservation   

   


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Template Conservation 

 

  

Template Sequence  ERMRRAEPA
Template Known Secondary structure 


Template Predicted Secondary structure 



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   17..20.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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