Job Description P24173 Confidence 98.81% Date Thu Jan 5 11:40:47 GMT 2012 Rank 9 Aligned Residues 300 % Identity 17% Template d1pn3a_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Gtf glycosyltransferase Resolution 2.80

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.
Query Sequence		M	R	V	L	I	V	K	T	S	S	M	G	D	V	L	H	T	L	P	A	L	T	D	A	Q	Q	A	I	P	G	I	K	F	D	W	V	V	E	E	G	F	A	Q	I	P	S	W	H	A	A	V	E	R	V	I	P	V	A	I	R	.	.	.	.	.	.	.	.	R	W	R	K	A	W	F	S	A	P	I	K
Query Conservation																																																														.	.	.	.	.	.	.	.
Alig confidence																													.	.																						.	.									.	.	.	.	.	.	.	.
Template Conservation																													.	.																						.	.
Template Sequence		M	R	V	L	I	T	G	C	G	S	R	G	D	T	E	P	L	V	A	L	A	A	R	L	R	E	L	.	.	G	A	D	A	R	M	C	L	P	P	D	Y	V	E	R	C	A	E	V	G	V	.	.	P	M	V	P	V	G	R	A	V	R	A	G	A	R	E	P	G	E	L	P	P	G	A	A	E	V	V	T
Template Known Secondary structure										S	S																	T	.	.	T									G	G	G								T		.	.						S	S		S	S	G	G	G	S		T	T				T	T		G	G	G
Template Predicted Secondary structure																													.	.																						.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																.	.	.
Query SS confidence														.	.																.	.	.
Query Sequence		A	E	R	K	A	F	R	E	A	L	Q	A	.	.	E	N	Y	D	A	V	I	D	A	Q	G	L	V	K	S	.	.	.	A	A	L	V	T	R	L	A	H	G	V	K	H	G	M	D	W	Q	T	A	R	E	P	L	A	S	L	F	Y	N	R	K	H	H	I	A	K	Q	Q	H	A	V	E	R	T	R	E	L
Query Conservation														.	.																.	.	.
Alig confidence														.	.																.	.	.
Template Conservation
Template Sequence		E	V	V	A	E	W	F	D	K	V	P	A	A	I	E	G	C	D	A	V	V	T	T	G	L	L	P	A	A	V	A	V	R	S	M	A	E	K	L	G	I	P	Y	R	Y	T	V	L	S	P	D	H	L	P	S	E	Q	S	Q	A	E	R	D	M	Y	N	Q	G	A	D	R	L	F	G	D	A	V	N	S	H
Template Known Secondary structure																T	T		S																						T								S	S	G	G	G	S	G	G	G	S																T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.																																			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	K	S	L	G	Y	S	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	Q	G	D	Y	A	I	A	Q	H	F	L	T	N	L	P	T	D	A	G	E	Y	A	V	F	L	H	A	T	T	R	D	D	K	H
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	S	I	G	L	P	P	V	E	H	L	Y	D	Y	G	Y	T	D	Q	P	W	L	A	A	D	P	V	L	S	P	L	R	P	T	D	L	G	T	V	Q	T	G	A	W	I	L	P	D	E	R	P	L	S	A	E	L	E	A	F	L	A	A	G	S	T	P	V	Y	V	G	F	G	S	S	S	R	P	A	T
Template Known Secondary structure				T	T	S														S	S					S		T	T	T	S				T	T			S			B																				T	T	S	S	S								T	T			S	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		W	P	E	E	H	W	R	E	L	I	G	L	L	A	D	S	G	I	R	I	K	L	P	W	G	A	P	H	E	E	E	R	A	K	R	L	A	E	G	F	A	Y	V	E	V	L	P	K	M	S	L	E	G	V	A	R	V	L	A	G	A	K	F	V	V	S	V	D	T	.	G	L	S	H	L	T	A	A	L	D
Query Conservation																																																																							.
Alig confidence		.	.																											.	.	.	.	.																						.	.	.													.
Template Conservation		.	.																											.	.	.	.	.																						.	.	.
Template Sequence		.	.	A	D	A	A	K	M	A	I	K	A	V	R	A	S	G	R	R	I	V	L	S	R	G	W	A	D	.	.	.	.	.	L	V	L	P	D	D	G	A	D	C	F	V	V	G	E	V	N	L	Q	E	L	.	.	.	F	G	R	V	A	A	A	I	H	H	D	S	A	G	T	T	L	L	A	M	R	A	G
Template Known Secondary structure		.	.														T	T								T	T	T	T	.	.	.	.	.				S	S			T	T					S	S							.	.	.		T	T	S	S						S												T
Template Predicted Secondary structure		.	.																											.	.	.	.	.																						.	.	.
Template SS confidence
				237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.				.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.								.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.
Query Sequence		R	P	N	I	T	V	Y	G	P	T	D	P	G	L	I	G	G	Y	G	.	.	.	.	.	.	.	K	N	Q	M	V	C	R	A	P	R	E	N	L	I	N	L	N	S	Q	A	V	L	E	K	L	S	S	L
Query Conservation																					.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation																																				.	.	.	.	.
Template Sequence		I	P	Q	I	V	V	R	R	V	V	D	N	V	V	E	Q	A	Y	H	A	D	R	V	A	E	L	G	V	G	V	A	V	D	G	.	.	.	.	.	P	V	P	T	I	D	S	L	S	A	A	L	D	T	A
Template Known Secondary structure									S	S			B	T	T	B												T	S							.	.	.	.	.	S	S
Template Predicted Secondary structure																																				.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340						.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions