Job Description P24173 Confidence 99.40% Date Thu Jan 5 11:40:47 GMT 2012 Rank 4 Aligned Residues 304 % Identity 12% Template c3ot5D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; PDBTitle: 2.2 angstrom resolution crystal structure of putative udp-n-2 acetylglucosamine 2-epimerase from listeria monocytogenes Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	V	L	I	V	K	T	S	S	M	G	D	V	L	H	T	L	P	A	L	T	D	A	Q	Q	A	I	P	G	I	K	F	D	W	V	V	E	E	G	F	A	Q	I	P	S	W	H	A	A	V	E	R	V	I	P	V	A	I	R	R	W	R	K	A	W	F	S	A	P	I	K	A	E	R	K	A	F	R	E
Query Conservation
Alig confidence								.																																																			.	.	.	.	.
Template Conservation								.																																																			.	.	.	.	.
Template Sequence		I	K	V	M	S	I	.	F	G	T	R	P	E	A	I	K	M	A	P	L	V	L	A	L	E	K	E	P	E	T	F	E	S	T	V	V	I	T	A	M	L	D	Q	V	L	E	I	F	D	I	K	P	D	I	D	L	D	.	.	.	.	.	I	G	Q	T	L	A	E	I	T	S	R	V	M	N	G	I	N	E
Template Known Secondary structure								.			S																T		T	T	T																		T	T				S					.	.	.	.	.
Template Predicted Secondary structure								.																																																			.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130										.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																																		.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.																																		.	.	.	.	.	.	.	.	.
Query Sequence		A	L	Q	A	E	N	Y	D	A	V	I	D	A	Q	G	L	V	.	.	.	K	S	A	A	L	V	T	R	L	A	H	G	V	K	H	G	M	D	W	Q	T	A	R	E	P	L	A	S	L	F	Y	N	R	.	.	.	.	.	.	.	.	.	K	H	H	I	A	K	Q	Q	H	A	V	E	R	T	R	E	L	F
Query Conservation																			.	.	.																																		.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	A	A	E	N	P	D	I	V	L	V	H	G	D	T	T	T	S	F	A	A	G	L	A	T	F	Y	Q	Q	K	M	L	G	H	V	E	A	G	L	R	T	W	N	K	Y	S	P	F	P	E	E	M	N	R	Q	L	T	G	V	M	A	D	I	H	F	S	P	T	K	Q	A	K	E	N	L	L	A	E	G
Template Known Secondary structure									S						T	T														T	T							S						S		T	T	T	T	T	T													S					S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
							149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220
Predicted Secondary structure		.	.	.	.	.																																																																								.	.	.
Query SS confidence		.	.	.	.	.																																																																								.	.	.
Query Sequence		.	.	.	.	.	A	K	S	L	G	Y	S	K	P	Q	T	Q	G	D	Y	A	I	A	Q	H	F	L	T	N	L	P	T	D	A	G	E	Y	A	V	F	L	H	A	T	T	R	D	D	K	H	W	P	E	E	H	W	R	E	L	I	G	L	L	A	D	S	G	I	R	I	K	L	P	W	G	A	.	.	.	P
Query Conservation		.	.	.	.	.																																																																								.	.	.
Alig confidence		.	.	.	.	.																																																																								.	.	.
Template Conservation
Template Sequence		K	D	P	A	T	I	F	V	T	G	N	T	A	I	D	A	L	K	T	T	V	Q	K	D	Y	H	H	P	I	L	E	N	L	G	D	N	R	L	I	L	M	T	A	H	R	R	E	N	L	G	E	P	M	Q	G	M	F	E	A	V	R	E	I	V	E	S	R	E	D	T	E	L	V	Y	P	M	H	L	N	P
Template Known Secondary structure				G	G	G											T					S		T	T								S		T	T															S	T																	T	T									S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	E	E	R	A	K	R	L	A	E	G	F	A	Y	V	E	V	L	P	K	M	S	L	E	G	V	A	R	V	L	A	G	A	K	F	V	V	S	V	D	T	G	L	S	H	L	T	A	A	L	D	R	P	N	I	T	V	Y	G	P	T	D	P	G	L	I	G	G	Y	G	K	N	Q	M	V	C	R	A	P
Query Conservation
Alig confidence																																																																												.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		A	V	R	E	K	A	M	A	I	L	G	G	H	E	R	I	H	L	I	E	P	L	D	A	I	D	F	H	N	F	L	R	K	S	Y	L	V	F	T	D	S	G	G	V	Q	E	E	A	P	G	M	G	V	P	V	L	V	L	R	D	T	T	E	R	P	E	G	I	E	A	G	T	L	K	.	.	.	.	.	.
Template Known Secondary structure												T	T		T	T																																	G	G	G	G	T								S	S		S							T	T	S			.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	N	L	I	N	L	N	S	Q	A	V	L	E	K	L	S	S	L
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	L	I	G	T	N	K	E	N	L	I	K	E	A	L	D	L
Template Known Secondary structure		.	.	.				S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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