 |
Job Description | P24173 | Confidence | 61.21% | Date | Thu Jan 5 11:40:47 GMT 2012 |
Rank | 88 | Aligned Residues | 78 |
% Identity | 28% | Template | c3lp6D_ |
PDB info |
PDB header:lyase | Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase catalytic subunit; |
PDBTitle: crystal structure of rv3275c-e60a from mycobacterium tuberculosis at2 1.7a resolution
|
Resolution | 1.70 Å |
|
 |
  |   |
207 | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 240 | . | . | |
. | . | . | . | . | . | . | 250 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | |
|
|
|
. | . | 270 |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
Query Sequence |   |
A | D | S | G | I | R | I | K | L | P | W | G | A | P | H | E | E | E | R | A | K | R | L | A | E | . |
. |
. |
. |
. |
. |
G | F | A | Y | V | E | V | L | P | K | M | . |
S | L | E | G | V | A | R | V | L | A | . |
. |
. |
. |
. |
G | A | K | F | V | V | S | V | D | T | G | L | S | H | L | . |
. |
. |
. |
T | A | A |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   | . |
|
|   |   |
|   |   |
|
|   | . | . | . | . | . |   |
|   |
|   |
|   |   |
|
|
|   |   |
|
| . | . | . | . |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |
|
|   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|   |   |
Template Sequence |   |
A | G | E | R | P | R | V | G | V | I | M | G | S | D | S | D | W | P | V | M | A | D | A | A | A | A | L | A | E | F | D | I | P | A | E | V | R | V | V | S | A | H | R | T | P | E | A | M | F | S | Y | A | R | G | A | A | A | R | G | L | E | V | I | I | A | G | A | G | G | A | A | H | L | P | G | M | V | A | A | A |
Template Known Secondary structure |   |
T | T |
|
|
| S |  |  |  |  |  | S | S | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
| T | T | T |
|  |  |  |  |  |  |  |  |  |  |  | G | G | G | T |
|
|  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
271 | . | . | . | . | . | . | . | . | 280 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | R | P | N | I | T | V | Y | G | P | T | D | P |
Query Conservation |   |
|
|   |
|   |
|   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|
|
|   |
|   |   |   |
Template Sequence |   |
T | P | L | P | V | I | G | V | P | V | P | L | G | R |
Template Known Secondary structure |   |
| S | S |
|  |  |  |  |  |  |
|
| S | S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|