Job Description P24173 Confidence 98.71% Date Thu Jan 5 11:40:47 GMT 2012 Rank 12 Aligned Residues 300 % Identity 16% Template c3iaaB_ PDB info PDB header:transferase Chain: B: PDB Molecule:calg2; PDBTitle: crystal structure of calg2, calicheamicin glycosyltransferase, tdp2 bound form Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	L	I	V	K	T	S	S	M	G	D	V	L	H	T	L	P	A	L	T	D	A	Q	Q	A	I	P	G	I	K	F	D	W	V	V	E	E	G	F	A	Q	I	P	S	W	H	A	A	V	E	R	V	I	P	V	A	I	R	R	W	R	K	A	W	F	S	A	P	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.																						.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.																						.	.
Template Sequence		H	L	L	I	V	N	V	A	S	H	G	L	I	L	P	T	L	T	V	V	T	E	L	V	R	R	.	.	G	H	R	V	S	Y	V	T	A	G	G	F	A	E	P	V	R	A	A	G	A	.	.	T	V	V	P	Y	Q	S	E	I	I	D	A	D	A	A	E	V	F	G	S	D	D	L	G	V	R	P	H	L
Template Known Secondary structure									S																		T	.	.	T									G	G	G							T	T		.	.								S	G	G	G							T	T	S		S	S
Template Predicted Secondary structure																												.	.																						.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
							71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																					.
Query SS confidence		.	.	.	.	.																					.
Query Sequence		.	.	.	.	.	I	K	A	E	R	K	A	F	R	E	A	L	Q	A	E	N	Y	D	A	V	.	I	D	A	Q	G	L	V	K	S	A	A	L	V	T	R	L	A	H	G	V	K	H	G	M	D	W	Q	T	A	R	E	P	L	A	S	L	F	Y	N	R	K	H	H	I	A	K	Q	Q	H	A	V	E	R	T
Query Conservation		.	.	.	.	.																					.
Alig confidence		.	.	.	.	.																					.
Template Conservation
Template Sequence		X	Y	L	R	E	N	V	S	V	L	R	A	T	A	E	A	L	D	G	D	V	P	D	L	V	L	Y	D	D	F	P	F	I	A	G	Q	L	L	A	A	R	W	R	R	P	A	V	R	L	S	A	A	F	A	S	N	E	H	Y	S	F	S	Q	D	X	V	T	L	A	G	T	I	D	P	L	D	L	P	V	F
Template Known Secondary structure																			S	S	S			S						S	T	T												T								S	S					S	S			T	T								T				G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.																																				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	L	F	A	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	Y	S	K	P	Q	T	Q	G	D	Y	A	I	A	Q	H	F	L	T	N	L	P	T	D	A	G	E	Y	A	V	F	L	H	A	T	T	R
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	T	L	R	D	L	L	A	E	H	G	L	S	R	S	V	V	D	C	W	N	H	V	E	Q	L	N	L	V	F	V	P	K	A	F	Q	I	A	G	D	T	F	D	D	R	F	V	F	V	G	P	C	F	D	D	R	R	F	L	G	E	W	T	R	P	A	D	D	L	P	V	V	L	V	S	L	G	T	T
Template Known Secondary structure												T	T		S								T				S					S	S		T	T	T	S	T	T	G	G	G			T	T												G	G	G							S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		D	D	K	H	W	P	E	E	H	W	R	E	L	I	G	L	L	A	D	S	G	I	R	I	K	L	P	W	G	A	P	H	E	E	E	R	A	K	R	L	A	E	G	F	A	Y	V	E	V	L	P	K	M	S	L	E	G	V	A	R	V	L	A	G	A	K	F	V	V	S	V	D	T	G	L	S	H	L	.	T
Query Conservation																																																																																.
Alig confidence						.	.																																.	.	.																		.	.	.																			.
Template Conservation						.	.																																.	.	.																		.	.	.
Template Sequence		F	N	D	R	.	.	P	G	F	F	R	D	C	A	R	A	F	D	G	Q	P	W	H	V	V	X	T	L	G	G	Q	V	D	P	A	A	L	.	.	.	G	D	L	P	P	N	V	E	A	H	R	W	V	P	H	V	K	.	.	.	V	L	E	Q	A	T	V	C	V	T	H	G	G	X	G	T	L	X	E	A
Template Known Secondary structure		S				.	.											T	T	T	S	S								T	T	S	S		G	G	G	G	.	.	.					T	T					S							.	.	.				T		S					S
Template Predicted Secondary structure						.	.																																.	.	.																		.	.	.
Template SS confidence
		239	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.				.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		269	270	.	.	.	.	.	.	.	.	.	280	.	.					.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		A	A	L	D	R	P	N	I	T	V	Y	G	P	T	.	.	.	.	D	P	G	L	I	G	G	Y	G	K	N	Q	M	V	C	R	A	P	R	E	N	L	I	N	L	N	S	Q	A	V	L	E	K	L	S	S	L
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.							.											.	.	.	.	.
Template Conservation																										.											.	.	.	.	.
Template Sequence		L	Y	W	G	R	P	L	V	V	V	P	Q	S	F	D	V	Q	P	X	A	R	R	V	D	.	Q	L	G	L	G	A	V	L	P	G	.	.	.	.	.	E	K	A	D	G	D	T	L	L	A	A	V	G	A	V
Template Known Secondary structure				T	T									S	G	G	G									.		T	T	S						G	.	.	.	.	.	G	G
Template Predicted Secondary structure																										.											.	.	.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.						.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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