Return to main results Retrieve Phyre Job Id

Job DescriptionP24173
Confidence25.55%DateThu Jan 5 11:40:47 GMT 2012
Rank179Aligned Residues60
% Identity12%Templatec3hfrA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of glutamate racemase from listeria monocytogenes
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  SSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAFREALQAENYD
Query Conservation    


 
   
 
  
    
   
  
       
    
 
  
                           
     
Alig confidence 



....


























...................

























Template Conservation 



....



   
    
    

  
    
...................

 

   
          
   
  
Template Sequence  SGVG. . . . GLTVVREVLKQLPHEQVYYLGDTARCP. . . . . . . . . . . . . . . . . . . YGPRDKEEVAKFTWEXTNFLVDRGIK
Template Known Secondary structure  SSST....T
TT


GGG

...................
TTS

Template Predicted Secondary structure 



....










...................








Template SS confidence 















































































   10... ......20.........30.........40 .........50.........60......
 
   8990.
Predicted Secondary structure 
Query SS confidence 


Query Sequence  AVI
Query Conservation    
Alig confidence 


Template Conservation   

Template Sequence  XLV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   67..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions