Job Description P24173 Confidence 37.93% Date Thu Jan 5 11:40:47 GMT 2012 Rank 144 Aligned Residues 74 % Identity 15% Template c3gjyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of a probable spermidine synthase from2 corynebacterium glutamicum atcc 13032 Resolution 1.47 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		M	R	V	L	I	V	K	T	S	S	M	G	D	V	L	H	T	L	P	A	L	T	D	A	Q	Q	A	I	P	G	I	K	F	D	W	V	.	V	E	E	G	F	A	Q	I	P	S	W	H	A	A	V	E	R	V	I	P	V	A	I	R	R	W	R	K	A	W	F	S	A	P	I	K	A	E	R	K	A	F	R
Query Conservation																																						.
Alig confidence														.	.	.	.	.	.	.																		.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	I	T	H	L	G	G	G	A	C	T	.	.	.	.	.	.	.	X	A	R	Y	F	A	D	V	Y	P	Q	S	R	N	T	V	V	E	L	D	A	E	L	A	R	L	S	R	E	W	F	D	I	.	.	.	.	.	.	.	.	.	.	.	P	R	A	P	R	V	K	I	R	V	D	D	A	R	X	V	A
Template Known Secondary structure								S		G	G	G		.	.	.	.	.	.	.									S	T	T								S												S			.	.	.	.	.	.	.	.	.	.	.			T	T	T						S
Template Predicted Secondary structure														.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.								100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.												.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	Q	A	E	N	Y	D	A	V	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	F	T	P	A	S	R	D	V	I	I	R
Template Known Secondary structure			T			T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions