Job Description P24173 Confidence 98.77% Date Thu Jan 5 11:40:47 GMT 2012 Rank 10 Aligned Residues 307 % Identity 13% Template c3dzcA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; PDBTitle: 2.35 angstrom resolution structure of wecb (vc0917), a udp-n-2 acetylglucosamine 2-epimerase from vibrio cholerae. Resolution 2.35 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		M	R	V	L	I	V	K	T	S	S	M	G	D	V	L	H	T	L	P	A	L	T	D	A	Q	Q	A	I	P	G	I	K	F	D	W	V	V	.	.	.	.	E	E	G	F	A	Q	I	P	S	W	H	A	A	V	E	R	V	I	P	V	A	I	R	R	W	R	K	A	W	F	S	A	P	I	K	A	E	R	K
Query Conservation																																							.	.	.	.
Alig confidence																													.	.									.	.	.	.																									.
Template Conservation																													.	.																																					.
Template Sequence		M	K	K	V	L	I	V	F	G	T	R	P	E	A	I	K	M	A	P	L	V	Q	Q	L	C	Q	D	.	.	N	R	F	V	A	K	V	C	V	T	G	Q	H	R	E	M	L	D	Q	V	L	E	L	F	S	I	T	P	D	F	D	L	N	I	M	E	.	P	G	Q	T	L	N	G	V	T	S	K	I	L	L
Template Known Secondary structure											S																		.	.	T	T										S	S	S										T	T				S								.	T	T
Template Predicted Secondary structure																													.	.																																					.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.										.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																					.	.	.																																		.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.																																		.	.	.	.	.	.	.	.	.
Query Sequence		A	F	R	E	A	L	Q	A	E	N	Y	D	A	V	I	D	A	Q	G	.	.	.	L	V	K	S	A	A	L	V	T	R	L	A	H	G	V	K	H	G	M	D	W	Q	T	A	R	E	P	L	A	S	L	F	Y	.	.	.	.	.	.	.	.	.	N	R	K	H	H	I	A	K	Q	Q	H	A	V	E	R	T
Query Conservation																					.	.	.																																		.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	M	Q	Q	V	L	S	S	E	Q	P	D	V	V	L	V	H	G	D	T	A	T	T	F	A	A	S	L	A	A	Y	Y	Q	Q	I	P	V	G	H	V	E	A	G	L	R	T	G	N	I	Y	S	P	W	P	E	E	G	N	R	K	L	T	A	A	L	T	Q	Y	H	F	A	P	T	D	T	S	R	A	N	L
Template Known Secondary structure													S						T	T	S												T	T	T							T						S		T	T	S	S	T	T											T		S					S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		145	.															.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	A	K	S	L	G	Y	S	K	P	Q	T	Q	G	D	Y	A	I	A	Q	H	F	L	T	N	L	P	T	D	A	G	E	Y	A	V	F	L	H	A	T	T	R	D	D	K	H	W	P	E	E	H	W	R	E	L	I	G	L	L	A	D	S	G
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	E	N	Y	N	A	E	N	I	F	V	T	G	N	T	V	I	D	A	L	L	A	V	R	E	K	I	H	T	D	M	D	L	Q	A	T	L	E	S	Q	F	P	M	L	D	A	S	K	K	L	I	L	V	T	G	H	R	R	E	S	F	G	G	G	F	E	R	I	C	Q	A	L	I	T	T	A	E	Q	H
Template Known Secondary structure				T	T			G	G	G																																T		T	T			T	T	S								S		B				T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		211	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		I	R	I	K	L	P	W	.	.	.	G	A	P	H	E	E	E	R	A	K	R	L	A	E	G	F	A	Y	V	E	V	L	P	K	M	S	L	E	G	V	A	R	V	L	A	G	A	K	F	V	V	S	V	D	T	G	L	S	H	L	T	A	A	L	D	R	P	N	I	T	V	Y	G	P	T	D	P	G	L	I
Query Conservation									.	.	.
Alig confidence									.	.	.
Template Conservation
Template Sequence		P	E	C	Q	I	L	Y	P	V	H	L	N	P	N	V	R	E	P	V	N	K	L	L	K	G	V	S	N	I	V	L	I	E	P	Q	Q	Y	L	P	F	V	Y	L	M	D	R	A	H	I	I	L	T	D	S	G	G	I	Q	E	E	A	P	S	L	G	K	P	V	L	V	M	R	E	T	T	E	R	P	E	A
Template Known Secondary structure		T	T									B												T	T	T		T	T																				S					S		S	G	G	G	T	T	G	G	G	G	T								S	S		S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	Y	G	K	N	Q	M	V	C	R	A	P	R	E	N	L	I	N	L	N	S	Q	A	V	L	E	K	L	S	S	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.
Template Sequence		V	A	A	G	T	V	K	.	.	.	.	.	.	.	.	.	L	V	G	T	N	Q	Q	Q	I	C	D	A	L	S	L	L
Template Known Secondary structure					T	S			.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.										.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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