Job Description P24173 Confidence 42.56% Date Thu Jan 5 11:40:47 GMT 2012 Rank 130 Aligned Residues 216 % Identity 13% Template c3aerB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b; PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark Resolution 2.80 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence		W	F	S	A	P	I	K	A	E	R	K	A	F	R	E	A	L	Q	A	E	N	Y	D	A	V	I	D	A	Q	G	L	V	K	S	A	A	L	V	T	R	L	A	H	G	V	K	H	G	M	D	W	Q	.	.	.	.	T	A	R	E	P	L	A	S	L	F	Y	N	R	K	H	H	I	A	K	Q	Q	H	A	V
Query Conservation																																																						.	.	.	.
Alig confidence																																																						.	.	.	.
Template Conservation
Template Sequence		A	L	G	F	R	H	R	D	D	V	A	E	V	T	K	L	L	A	T	M	G	I	K	V	N	V	C	A	P	L	G	A	S	P	D	D	L	R	K	L	G	Q	A	H	F	N	V	L	M	Y	P	E	T	G	E	S	A	A	R	H	L	E	R	A	C	K	Q	P	F	T	K	I	V	P	I	G	V	G	A	T
Template Known Secondary structure		T	T		T	T														T	T	T									T	T							T	T	G	G	G	S	S																									B							S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		E	R	T	R	E	L	F	A	K	S	L	G	Y	S	K	P	Q	T	Q	G	D	Y	A	I	A	Q	H	F	L	T	N	L	P	T	D	A	G	E	Y	A	V	F	L	H	A	T	T	R	D	D	K	H	W	P	E	E	H	W	R	E	L	I	G	L	L	A	.	D	S	G	I	R	I	K	L	P	W	G	A	P
Query Conservation																																																																				.
Alig confidence																																																.	.	.	.	.	.	.	.													.
Template Conservation																																																.	.	.	.	.	.	.	.
Template Sequence		R	D	F	L	A	E	V	S	K	I	T	G	L	P	V	V	T	D	E	S	T	L	R	Q	P	W	W	S	A	S	V	D	S	T	Y	L	T	G	K	R	V	F	I	F	G	D	.	.	.	.	.	.	.	.	G	T	H	V	I	A	A	A	R	I	A	A	K	E	V	G	F	E	V	V	G	M	G	C	Y	N
Template Known Secondary structure																					T	T									S	G	G	G	G	G	G	T	T							S	S	.	.	.	.	.	.	.	.														T	T										S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.									.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290
Predicted Secondary structure																																			.	.																																				.	.	.	.
Query SS confidence																																			.	.																																				.	.	.	.
Query Sequence		H	E	E	E	R	A	K	R	L	A	E	G	F	A	Y	V	E	V	L	P	K	M	S	L	E	G	V	A	R	V	L	A	G	.	.	A	K	F	V	V	S	V	D	T	G	L	S	H	L	T	A	A	L	D	R	P	N	I	T	V	Y	G	P	T	D	P	G	L	I	G	.	.	.	.	G	Y
Query Conservation																																			.	.																																				.	.	.	.
Alig confidence																																			.	.								.																												.	.	.	.
Template Conservation																																												.
Template Sequence		R	E	M	A	R	P	L	R	T	A	A	A	E	Y	G	L	E	A	L	I	T	D	D	Y	L	E	V	E	K	A	I	E	A	A	A	P	E	L	I	L	G	T	.	Q	M	E	R	N	I	A	K	K	L	G	L	P	C	A	V	I	S	A	P	V	H	V	Q	D	F	P	A	R	Y	A	P	Q
Template Known Secondary structure		G	G	G										T	T	T							S															S						.										T	T							S		S			S	T	T	S		S	S				S
Template Predicted Secondary structure																																												.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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