Job Description P24173 Confidence 98.00% Date Thu Jan 5 11:40:47 GMT 2012 Rank 26 Aligned Residues 273 % Identity 11% Template c2xmpB_ PDB info PDB header:sugar binding protein Chain: B: PDB Molecule:trehalose-synthase tret; PDBTitle: crystal structure of trehalose synthase tret mutant e326a2 from p.horishiki in complex with udp Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		M	R	V	L	I	V	K	T	S	S	M	G	.	.	D	V	L	H	T	L	P	A	L	T	D	A	Q	Q	A	I	P	G	I	K	F	D	W	V	V	E	E	G	F	A	Q	I	P	S	W	H	A	A	V	E	R	V	I	P	V	A	I	R	R	W	R	K	A	W	F	S	A	P	I	K	A	E	R	K	A	F
Query Conservation														.	.
Alig confidence														.	.																.	.
Template Conservation																															.	.
Template Sequence		R	S	F	V	H	V	N	S	T	S	F	G	G	G	V	A	E	I	L	H	S	L	V	P	L	L	R	S	I	.	.	G	I	E	A	R	W	F	V	I	E	G	P	T	E	F	F	N	V	T	K	T	F	H	N	A	L	Q	G	N	E	S	L	K	L	T	E	E	M	K	E	L	Y	L	N	V	N	R	E	N
Template Known Secondary structure									S		S	S	S	S															T	T	.	.	T																										T	S		T	T																		T
Template Predicted Secondary structure																															.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.							.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																														.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.
Query Sequence		R	E	A	L	Q	A	E	N	Y	D	A	V	I	D	A	Q	G	L	V	K	S	A	A	L	V	T	R	L	A	H	G	V	K	H	G	M	D	W	Q	T	A	R	E	P	.	.	.	.	.	.	L	A	S	L	F	Y	N	R	K	H	H	I	A	K	Q	Q	H	A	V	E	R	T	R	E	L	F	A	K	S	L
Query Conservation																																														.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	F	I	D	L	S	S	F	D	Y	V	L	V	H	D	P	Q	P	A	A	L	I	E	F	Y	E	K	K	S	P	W	L	W	R	C	H	I	D	L	S	S	P	N	R	E	F	W	E	F	L	R	R	F	V	E	K	Y	D	R	Y	I	F	H	L	P	E	Y	V	Q	P	E	L	D	R	N	K	A	V	I
Template Known Secondary structure		T	T	T	S		S	T	T	S	S						S	S	T	T	G	G	G	G	G	S	S				S								S			S	S														T	T	S	S					S	S	T	T	S			T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		153	.	.	.	.	.							.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure								.	.	.	.	.	.																																																															.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.																																																															.	.	.	.	.	.
Query Sequence		G	Y	S	K	P	Q	.	.	.	.	.	.	T	Q	G	D	Y	A	I	A	Q	H	F	L	T	N	L	P	T	D	A	G	E	Y	A	V	F	L	H	A	T	T	R	D	D	K	H	W	P	E	E	H	W	R	E	L	I	G	L	L	A	D	S	G	I	R	I	K	L	P	W	G	A	P	.	.	.	.	.	.
Query Conservation								.	.	.	.	.	.																																																															.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																																				.	.																										.	.	.	.	.	.
Template Conservation																																																	.	.
Template Sequence		M	P	P	S	I	D	P	L	S	E	K	N	V	E	L	K	Q	T	E	I	L	R	I	L	E	R	F	D	V	D	P	E	K	P	I	I	T	Q	V	S	R	F	D	P	W	K	G	.	.	I	F	D	V	I	E	I	Y	R	K	V	K	E	K	I	P	G	V	Q	L	L	L	V	G	V	M	A	H	D	D	P
Template Known Secondary structure						B		T	T	S	T	T	T	S														T	T			T	T	S										S	T	T	S		.	.																T	T											T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
								221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																												.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																												.	.	.	.	.
Query Sequence		.	.	.	.	.	.	H	E	E	E	R	A	K	R	L	A	E	G	F	A	Y	V	E	V	L	P	K	M	S	L	E	G	V	A	R	V	L	A	G	A	K	F	V	V	S	V	D	T	G	.	.	.	.	.	L	S	H	L	T	A	A	L	D	R	P	N	I	T
Query Conservation		.	.	.	.	.	.																																												.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																												.	.	.	.	.
Template Conservation
Template Sequence		E	G	W	I	Y	F	E	K	T	L	R	K	I	G	E	D	Y	D	V	K	V	L	T	N	L	I	G	V	H	A	R	E	V	N	A	F	Q	R	A	S	D	V	I	L	Q	M	S	I	R	A	G	F	G	L	T	V	T	E	A	M	W	K	G	K	P	V	I	G
Template Known Secondary structure															T	T		T	T						G	G	G	T												T		S							S	S		S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions