Job Description P24173 Confidence 23.80% Date Thu Jan 5 11:40:47 GMT 2012 Rank 191 Aligned Residues 207 % Identity 12% Template c2xdqB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b; PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		K	A	E	R	K	A	F	R	E	A	L	Q	A	E	N	Y	D	A	V	I	D	A	Q	G	L	V	K	S	A	A	L	V	T	R	L	A	H	G	V	K	H	G	M	D	W	Q	T	A	R	E	P	.	.	.	.	L	A	S	L	F	Y	N	R	K	H	H	I	A	K	Q	Q	H	A	V	E	R	T	R	E	L
Query Conservation																																																					.	.	.	.
Alig confidence																																																					.	.	.	.
Template Conservation
Template Sequence		Q	H	D	C	R	E	L	K	Q	L	M	A	D	L	G	I	Q	V	N	L	V	I	P	A	A	A	T	V	H	D	L	Q	R	L	P	Q	A	W	F	N	L	V	P	Y	R	E	I	G	G	L	T	A	Q	Y	L	E	R	E	F	G	Q	P	S	V	R	I	T	P	M	G	V	V	E	T	A	R	C	I	R	A
Template Known Secondary structure																T									T	T			T	T	T	G	G	G	G	G	G	S	S							T	T	S	S																						S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.												.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		F	A	K	S	L	G	Y	S	K	P	Q	T	Q	G	D	Y	A	I	A	Q	H	F	L	T	N	L	P	T	.	.	.	.	.	.	.	.	.	.	.	D	A	G	E	Y	A	V	F	L	H	A	T	T	R	D	D	K	H	W	P	E	E	H	W	R	E	L	I	G	L	L	.	A	D	S	G	I	R	I	K	L
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.												.
Template Conservation																																																				.	.	.	.	.	.	.	.	.
Template Sequence		I	Q	G	V	L	N	A	Q	G	A	G	V	N	Y	E	A	F	I	E	Q	Q	T	R	E	V	S	Q	A	A	W	F	S	R	S	I	D	C	Q	N	L	T	G	K	K	A	V	V	F	G	D	.	.	.	.	.	.	.	.	.	N	T	H	A	A	A	M	T	K	I	L	S	R	E	M	G	I	H	V	V	W
Template Known Secondary structure								T	T	T																T									S					T	T	T	T									.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.										.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		P	W	G	A	P	H	E	E	E	R	A	K	R	L	A	E	G	F	A	Y	V	E	V	L	P	K	M	S	L	E	G	V	A	R	V	L	A	G	.	.	A	K	F	V	V	S	V	D	T	G	L	S	H	L	T	A	A	L	D	R	P	N	I	T	V	Y	G	P	T	D	P	G	L	I	G
Query Conservation																																								.	.
Alig confidence																																								.	.								.
Template Conservation																																																	.
Template Sequence		A	G	T	Y	C	K	Y	D	A	D	W	F	R	A	E	V	A	G	F	C	D	E	V	L	I	T	D	D	H	T	V	V	G	D	A	I	A	R	V	E	P	A	A	I	F	G	T	.	Q	M	E	R	H	V	G	K	R	L	N	I	P	C	G	V	I	A	A	P	I	H	I	Q	D	F	P
Template Known Secondary structure					S		G	G	G									T	T	T	S	S																					S						.											T							S	S	S			G	G	G	S
Template Predicted Secondary structure																																																	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions