Job Description P24173 Confidence 98.83% Date Thu Jan 5 11:40:47 GMT 2012 Rank 8 Aligned Residues 294 % Identity 12% Template c2gejA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphatidylinositol mannosyltransferase (pima); PDBTitle: crystal structure of phosphatidylinositol mannosyltransferase (pima)2 from mycobacterium smegmatis in complex with gdp-man Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		M	R	V	L	I	V	K	T	S	S	M	.	.	.	.	G	D	V	L	H	T	L	P	A	L	T	D	A	Q	Q	A	I	P	G	I	K	F	D	W	V	V	E	E	G	F	A	Q	I	P	S	W	H	A	A	V	E	R	V	I	P	V	A	I	R	R	W	R	K	A	W	F	S	A	P	I	K	A	E	R	K
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.																	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	I	G	M	V	C	P	Y	S	F	D	V	P	G	G	V	Q	S	H	V	L	Q	L	A	E	V	L	R	D	A	.	.	G	H	E	V	S	V	L	A	P	A	S	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	L	P	D	Y	V	V	S	G	G	K	A	V	F	G	P	A	T	H	R
Template Known Secondary structure										S		T	T	S																		T	.	.	T								S			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S				T	T
Template Predicted Secondary structure																																	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.														.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.										.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.
Query Sequence		A	F	R	E	A	L	Q	A	E	N	Y	D	A	V	I	D	A	Q	G	L	V	K	S	A	A	L	V	T	R	L	A	H	G	V	K	H	G	M	D	W	Q	T	A	R	E	.	.	.	.	.	.	.	.	.	P	L	A	S	L	F	Y	N	R	K	H	H	I	A	K	Q	Q	H	A	V	E	R	T	R	E	L
Query Conservation																																															.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	K	K	W	I	A	E	G	D	F	D	V	L	H	I	H	E	P	N	A	P	S	L	S	M	L	A	L	Q	A	A	E	G	P	I	V	A	T	F	H	T	S	T	T	K	S	L	T	L	S	V	F	Q	G	I	L	R	P	Y	H	E	K	I	I	G	R	I	A	V	S	D	L	A	R	R	W	Q	M	E
Template Known Secondary structure													S									S	S	S											S	S																				S	T	T						T		S					S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		F	A	K	S	L	G	Y	S	K	P	Q	T	Q	G	D	Y	A	I	A	Q	H	F	L	T	N	L	P	T	D	A	G	E	Y	A	V	F	L	H	A	T	T	R	D	D	K	H	W	P	E	E	H	W	R	E	L	I	G	L	L	A	D	S	G	I	R	I	.	K	L	P	W	G	A	P	H	E	E	E	R	A
Query Conservation																																																																				.
Alig confidence																																																.	.																			.
Template Conservation																																																.	.
Template Sequence		A	L	G	S	D	A	V	E	I	P	N	G	V	D	V	A	S	F	A	D	A	P	L	L	D	G	Y	P	R	E	G	R	T	V	L	F	L	G	R	Y	D	E	P	R	K	G	.	.	M	A	V	L	L	A	A	L	P	K	L	V	A	R	F	P	D	V	E	I	L	I	V	G	R	G	D	E	D	E	L	R
Template Known Secondary structure				S	S									B							T					T	T		S		T	T							S		T	T	S	G	G	G		.	.																T	T							S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.							.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																						.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.
Query Sequence		K	R	L	A	E	G	F	A	Y	V	E	V	L	P	K	M	S	L	E	G	V	A	R	V	L	A	G	A	K	F	V	V	S	V	D	T	.	.	.	.	.	.	G	L	S	H	L	T	A	A	L	D	R	P	N	I	T	V	Y	G	P	T	D	P	G	L	I	G	G	Y	G	K	N	Q	M	V	C	R	A	P
Query Conservation																																						.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.																										.
Template Conservation																																																																					.
Template Sequence		E	Q	A	G	D	L	A	G	H	L	R	F	L	G	Q	V	D	D	A	T	K	A	S	A	M	R	S	A	D	V	Y	C	A	P	H	L	G	G	E	S	F	G	I	V	L	V	E	A	M	A	A	G	T	A	V	V	A	S	D	L	D	A	F	R	R	V	L	.	A	D	G	D	A	G	R	L	V	P	V	D
Template Known Secondary structure				T	G	G	G	G	G	G						S												T		S								S			S	S											T																.	G	G	G	T	S	S					T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	N	L	I	N	L	N	S	Q	A	V	L	E	K	L	S	S	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	D	A	D	G	M	A	A	A	L	I	G	I
Template Known Secondary structure		.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									315	.	.	.	.	320	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions