Return to main results Retrieve Phyre Job Id

Job DescriptionP18471
Confidence4.71%DateThu Jan 5 11:36:58 GMT 2012
Rank38Aligned Residues55
% Identity15%Templated1x7fa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Outer surface protein, N-terminal domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   219220.........230.........240.........250..... ....260.........270.. .......280.
Predicted Secondary structure 















.
















....







Query SS confidence 




































.
















. . . .








Query Sequence  QGSMYPFNGWVSNESSPLQSSLLVSERMAFKLHRQGM. IMETIGKNNAVCNEYPS. . . . PILPKERWR
Query Conservation 


 




 
      







 
   



 

.
  
 
     
   
 ....

  




Alig confidence 
















........











.
















....








Template Conservation   





  



   
........   
  

  

   


 
    


 

 






 

  
Template Sequence  CHNFYPQKFTGLPYDYF. . . . . . . . IRCSERFKKHGIRSAAFITSHVANIGPWDINDGLCTLEEHRNL
Template Known Secondary structure 


B
STT
SB
........TT




SS

B
SSS

S

BSBGGGTTS
Template Predicted Secondary structure 










........



















Template SS confidence 



































































   146...150.........160.. .......170.........180.........190.........200.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions