 |
Job Description | P18471 | Confidence | 3.35% | Date | Thu Jan 5 11:36:58 GMT 2012 |
Rank | 68 | Aligned Residues | 29 |
% Identity | 38% | Template | d1g5ga1 |
SCOP info | Head and neck region of the ectodomain of NDV fusion glycoprotein
| Head and neck region of the ectodomain of NDV fusion glycoprotein
| Head and neck region of the ectodomain of NDV fusion glycoprotein
|
Resolution | 3.30 |
|
  |   |
61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | N | P | S | M | P | I | Q | I | C | P | A | P | P | P | L | F | R | R | I | G | L | A | I | G | Y | W | E | P | M | A | L | T | D |
Query Conservation |   |
  |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
A | N | C | K | M | T | T | C | R | C | A | D | P | P | G | I | . |
. |
. |
. |
. |
I | S | Q | N | Y | G | E | A | V | S | L | I | D |
Template Known Secondary structure |   |
 |
| T | T | T | S |
|
| B |
| S | S | S |
| S | B | . | . | . | . | . |
|
|
|
| T | T | T |
| S | B |
|
|
|
Template Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
392 | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 410 | . | . | . | . | . | . | . | . | . | 420 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|