Job Description P0ADQ7 Confidence 23.53% Date Thu Jan 5 11:21:35 GMT 2012 Rank 14 Aligned Residues 78 % Identity 13% Template c3lf9A_ PDB info PDB header:immune system Chain: A: PDB Molecule:4e10_d0_1is1a_001_c (t161); PDBTitle: crystal structure of hiv epitope-scaffold 4e10_d0_1is1a_001_c Resolution 2.00 Å

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Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.											.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																																								.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.																																								.
Query Sequence		R	N	D	V	D	D	G	V	Q	D	I	Q	N	D	V	N	Q	L	.	.	.	.	.	.	.	.	.	.	A	D	S	L	E	S	V	L	K	S	W	G	S	D	A	K	G	E	A	E	A	A	R	S	K	A	Q	A	L	L	K	E	T	R	A	R	M	H	G	.	R	T	R	V	Q	Q	A	A	R	D	A	V
Query Conservation																				.	.	.	.	.	.	.	.	.	.																																								.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation
Template Sequence		Q	E	R	M	D	K	S	V	E	A	L	K	N	N	L	S	K	V	R	T	G	G	G	G	T	E	E	R	R	K	D	L	V	K	I	V	R	G	E	A	E	G	G	R	V	A	V	R	N	I	A	R	D	A	A	N	D	L	A	A	L	G	K	D	K	E	V	N	W	F	D	I	S	Q	A	L	W	E	I	Q
Template Known Secondary structure																						S	S	B																																						G	G	G		T	T	S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	A	D	S	F	V	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	T	D	V	A	V	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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