Job Description P0ADQ7 Confidence 3.19% Date Thu Jan 5 11:21:35 GMT 2012 Rank 97 Aligned Residues 84 % Identity 14% Template c2a01B_ PDB info PDB header:lipid transport Chain: B: PDB Molecule:apolipoprotein a-i; PDBTitle: crystal structure of lipid-free human apolipoprotein a-i Resolution 2.40 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		F	N	R	P	N	R	N	D	V	D	D	G	V	Q	D	I	Q	N	D	V	N	Q	L	A	D	S	L	E	S	V	L	K	S	W	G	S	D	A	K	G	E	A	E	A	A	R	S	K	A	Q	A	L	L	K	E	T	R	A	R	M	H	G	.	R	T	R	V	Q	Q	A	A	R	D	A	V	G	C	A	D	S
Query Conservation																																																																.
Alig confidence																																																																.
Template Conservation
Template Sequence		L	G	K	Q	L	N	L	K	L	L	D	N	W	D	S	V	T	S	T	F	S	K	L	R	E	Q	L	G	P	V	T	Q	E	F	W	D	N	L	E	K	E	T	E	G	L	R	Q	E	M	S	K	D	L	E	E	V	K	A	K	V	Q	P	Y	L	D	D	F	Q	K	K	W	Q	E	E	M	E	L	Y	R	Q
Template Known Secondary structure		T	T			S			T	T	T	T	T																																		T	T	T	S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		85	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	R	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	E	P	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions