Job Description P46187 Confidence 39.79% Date Thu Jan 5 12:04:12 GMT 2012 Rank 23 Aligned Residues 53 % Identity 19% Template c1s1hQ_ PDB info PDB header:ribosome Chain: Q: PDB Molecule:40s ribosomal protein s11; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

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		5	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																																										.
Query SS confidence										.																																										.
Query Sequence		W	A	T	V	V	S	W	Q	.	N	G	Q	A	L	V	S	C	D	V	K	A	S	C	S	S	C	A	S	R	A	G	C	G	S	R	V	L	N	K	L	G	P	Q	T	T	H	T	I	V	V	.	P	C	D	E	P	L	V	P	G	Q	K	V	E	L	G
Query Conservation										.																																										.
Alig confidence										.												.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	T	V	V	S	T	K	M	H	R	T	I	V	I	R	R	A	Y	L	.	.	.	.	.	.	.	.	.	.	.	H	Y	I	P	K	Y	N	R	Y	E	K	R	H	K	N	V	P	V	H	V	S	P	A	F	R	V	Q	V	G	D	I	V	T	V	G
Template Known Secondary structure										S	S	S										.	.	.	.	.	.	.	.	.	.	.				T	T	T															S	S	S	S	S			T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90												.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions