Job Description P08956 Confidence 98.36% Date Thu Jan 5 11:01:43 GMT 2012 Rank 140 Aligned Residues 105 % Identity 20% Template c1pjrA_ PDB info PDB header:helicase Chain: A: PDB Molecule:pcra; PDBTitle: structure of dna helicase Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.			.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		L	R	Y	Y	Q	E	D	A	V	R	A	V	E	K	A	I	V	K	G	Q	Q	E	I	L	L	A	M	A	T	G	T	G	K	T	R	T	A	I	A	M	M	F	R	L	I	Q	S	Q	R	F	.	.	K	R	I	L	F	L	V	D	R	R	S	L	G	E	Q	A	L	G	A	F	E	D	T	R	I	N	G	D
Query Conservation																																																				.	.
Alig confidence													.	.	.	.	.	.	.																																	.	.																							.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.																																																									.	.	.	.	.	.
Template Sequence		L	N	K	E	Q	Q	E	A	V	R	T	.	.	.	.	.	.	.	T	E	G	P	L	L	I	M	A	G	A	G	S	G	K	T	R	V	L	T	H	R	I	A	Y	L	M	A	E	K	H	V	A	P	W	N	I	L	A	I	T	F	T	N	K	A	A	R	E	M	R	E	R	V	Q	S	.	.	.	.	.	.
Template Known Secondary structure		S											.	.	.	.	.	.	.		S	S								T	T	S																T	T				G	G	G						S	S														.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.																																																									.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.								.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	N	S	I	F	D	I	K	G	L	T	D	K	F	P	E	D	S	T	K	I	H	V	A	T	V	Q	S	L	V	K	R	T	L	Q	S	D	E	P	M	P	V	A	R	Y	D	C	I	V	V	D	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	G	G	A	A	E	D	V	W	I	S	T	F	H	S	M	C	V	R	I	L	R	R	D	I	D	R	I	G	I	N	R	N	F	S	I	L	D	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	G	T	T	S																	G	G	G	G	T			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions