140 c1pjrA_ Probab=98.36   E-value=7.6e-06  Score=57.11  Aligned_columns=105  Identities=20%

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC--CEEEEECCCHHHHHHHHHHHHHCCCCCC
Q ss_conf             87899999999999987089856896787787889999999999951799--8799974828999999999996178866
Q batch____       445 LRYYQEDAVRAVEKAIVKGQQEILLAMATGTGKTRTAIAMMFRLIQSQRF--KRILFLVDRRSLGEQALGAFEDTRINGD  522 (1170)
Q Consensus       445 lR~yQ~~AI~~i~~~~~~~~r~~Li~maTGsGKT~tai~li~~L~~~~~~--krVLflvdr~~L~~Q~~~~f~~~~~~~~  522 (1170)
                      |-+-|.+||..       ..+..||+.+-|||||.+++..+..|+..++.  .+||++++++.-+++....+..      
T Consensus        12 L~~~Q~~ai~~-------~~~~~lV~GppGTGKT~~l~~~i~~ll~~~~~~~~~ILv~s~tn~A~d~~~~ri~~------   78 (623)
T c1pjrA_          12 LNKEQQEAVRT-------TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQS------   78 (623)
T ss_dssp             SCHHHHHHHHC-------CSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHH------
T ss_pred             CCHHHHHHHHC-------CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHH------
T ss_conf             38898999958-------89978999488986779999999999980899977878974698999999999999------


Q ss_pred             CEEECCCHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCHHHCCEEEEEC
Q ss_conf             11300340220000226789889985888988765200013500065688407
Q batch____       523 TFNSIFDIKGLTDKFPEDSTKIHVATVQSLVKRTLQSDEPMPVARYDCIVVDE  575 (1170)
Q Consensus       523 ~~~~i~~~~~~~~~~~~~~~~I~i~T~q~l~~~~~~~~~~~~~~~fdlIIiDE  575 (1170)
                                   ........+-|.|+++|...+.........-..++-++|+
T Consensus        79 -------------~~~~~~~~~~i~T~~sf~~~il~~~~~~~~~~~~~~~~~~  118 (623)
T c1pjrA_          79 -------------LLGGAAEDVWISTFHSMCVRILRRDIDRIGINRNFSILDP  118 (623)
T ss_dssp             -------------HHGGGGTTSEEEEHHHHHHHHHHHHGGGGTCCTTCEECCH
T ss_pred             -------------HHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEECCH
T ss_conf             -------------6101102768975279999999872887498989727798