Job Description Q46836 Confidence 98.68% Date Thu Jan 5 12:35:03 GMT 2012 Rank 1 Aligned Residues 141 % Identity 19% Template c3s0xB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:peptidase a24b, flak domain protein; PDBTitle: the crystal structure of gxgd membrane protease flak Resolution 3.60 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	W	G	L	A	V	M	I	L	S	A	W	L	I	A	A	S	V	I	D	L	D	H	Q	W	L	P	D	V	F	T	Q	G	V	L	W	T	G	L	I	A	A	W	A	Q	Q	S	P	L	T	L	Q	D	A	V	T	G	V	L	V	G	F	I	T	F	Y	S	L	R	W	I	A	G	I	V	L	R	K	E
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		S	G	S	X	I	E	Y	I	I	G	A	L	G	L	I	I	A	S	V	Q	D	F	R	S	R	E	I	E	D	Y	I	W	I	F	L	A	V	F	G	V	L	F	A	I	Y	S	S	I	T	L	L	D	Y	S	I	L	I	N	S	I	S	G	F	V	I	C	F	I	L	G	Y	X	X	F	L	S	.	.	.	.
Template Known Secondary structure																					T	T					S																											S																							T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.																				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.																				.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	G	M	G	D	V	L	L	F	A	A	L	G	G	W	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	L	S	L	P	N	V	A	L	I	A	S	C	C	G	L	I	Y	A	V	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	G	G	G	D	G	K	X	L	I	G	L	G	A	L	V	P	K	F	Q	X	P	I	Y	T	S	L	G	T	L	L	N	L	N	Y	V	P	T	F	P	I	X	V	F	I	N	G	I	F	F	X	V	F	L	P	F	V	I	L	F	R	N	I	L	N	G	A	R	P	K	I	L	X	F	F	G	E	K	X
Template Known Secondary structure		T	S													T	T	S	S	S							S						T		S	S	S																T	T																								S
Template Predicted Secondary structure
Template SS confidence
		574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	T	T	L	P	F	G	P	C	L	S	L	G	G	I	A	T	L	Y	L	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	P	Q	I	P	L	I	I	P	I	T	L	S	Y	L	V	T	P	I	I	G	D
Template Known Secondary structure								T															T	T
Template Predicted Secondary structure
Template SS confidence
		699	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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