Return to main results Retrieve Phyre Job Id

Job DescriptionQ46836
Confidence49.59%DateThu Jan 5 12:35:03 GMT 2012
Rank42Aligned Residues20
% Identity25%Templatec2l0bA_
PDB info PDB header:ligaseChain: A: PDB Molecule:e3 ubiquitin-protein ligase praja-1; PDBTitle: solution nmr structure of zinc finger domain of e3 ubiquitin-protein2 ligase praja-1 from homo sapiens, northeast structural genomics3 consortium (nesg) target hr4710b
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   81........90.........100
Predicted Secondary structure 









Query SS confidence 



















Query Sequence  LFSWLMLKGRCRDCQAKISK
Query Conservation 
 
 
 





 
   
  
Alig confidence 



















Template Conservation 
  

     

 

  

 
Template Sequence  VSIWLQKSGTCPVCRCMFPP
Template Known Secondary structure  TTT
B
TTT

BSS
Template Predicted Secondary structure 












Template SS confidence 



















   70.........80.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions