Job Description Q46836 Confidence 49.76% Date Thu Jan 5 12:35:03 GMT 2012 Rank 41 Aligned Residues 44 % Identity 16% Template c1z2qA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:lm5-1; PDBTitle: high-resolution solution structure of the lm5-1 fyve domain2 from leishmania major Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	Q	M	A	E	F	H	G	E	M	S	S	A	Q	S	K	I	S	L	A	L	P	R	S	H	C	P	H	C	Q	Q	T	I	R	I	R	D	N	I	P	L	F	S	W	L	M	L	K	G	R	C	R	D	C	Q	A
Query Conservation
Alig confidence																						.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.															.	.	.	.	.	.	.	.	.
Template Sequence		P	L	G	S	M	G	E	K	Q	S	K	G	Y	W	Q	E	D	E	D	A	.	.	.	.	P	A	C	N	G	C	G	C	V	F	T	T	T	V	.	.	.	.	.	.	.	.	.	R	R	H	H	C	R	N	C	G	Y
Template Known Secondary structure				T	T			T	T				S					T	T	T		.	.	.	.		B		T	T	T			B			T	T	S	.	.	.	.	.	.	.	.	.						T	T	T
Template Predicted Secondary structure																						.	.	.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.										.	.	.	.	40	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions