Return to main results Retrieve Phyre Job Id

Job DescriptionQ46836
Confidence23.67%DateThu Jan 5 12:35:03 GMT 2012
Rank151Aligned Residues39
% Identity21%Templatec1x4lA_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:skeletal muscle lim-protein 3; PDBTitle: solution structure of lim domain in four and a half lim2 domains protein 2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80... ......90.........
Predicted Secondary structure 













.....









Query SS confidence 






















. . . . .















Query Sequence  LPRSHCPHCQQTIRIRDNIPLFS. . . . . WLMLKGRCRDCQAKIS
Query Conservation   


 
  
   
   




 
..... 
 





 
   
 
Alig confidence 






















.....















Template Conservation       
  
   
        
       
  

 
  
   
 
Template Sequence  SGSSGCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLV
Template Known Secondary structure  S
S
SBTTTTB



SSS
S

SS

TTT
B
SSS

B
T
Template Predicted Secondary structure 
























Template SS confidence 











































   3......10.........20.........30.........40......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions