Job Description P23883 Confidence 24.88% Date Thu Jan 5 11:40:20 GMT 2012 Rank 63 Aligned Residues 113 % Identity 14% Template c3v4gA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:arginine repressor; PDBTitle: 1.60 angstrom resolution crystal structure of an arginine repressor2 from vibrio vulnificus cmcp6 Resolution 1.60 Å

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		83	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		R	K	A	V	L	N	K	L	A	D	L	M	E	A	.	.	.	.	H	A	E	E	L	A	L	L	E	T	L	D	T	G	K	P	I	R	H	S	L	R	D	D	I	P	G	A	A	R	A	I	R	W	Y	A	E	A	I	D	K	V	Y	G	E	V	A	T	T	S	S	H	E	L	A	M	I	V	R	E	P	V
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Sequence		Q	D	N	L	V	R	A	F	K	A	L	L	K	E	E	R	F	G	S	Q	G	E	I	V	E	A	L	K	Q	E	G	F	E	N	I	N	Q	S	K	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	R	M	L	T	K	F	G	A	V	R	T	R	N	A	K	M	E	M	V	Y	C	L	P	T	.	.
Template Known Secondary structure																T				S											T	T		T	T								.	.	.	.	.	.	.	.	.	.	.	.	.						T	T							T	T	S									.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.														.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	I	A	A	I	V	P	W	N	F	P	L	L	L	T	C	W	K	L	G	P	A	L	A	A	G	N	S	V	I	L	K	P	S	E	K	S	P	L	S	A	I	R	L	A	G	L	A	K	E	A	G	L	P	D	G	V	L	N	V	V	T	G	F	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	V	S	S	S	L	R	E	L	V	L	D	V	D	H	N	Q	A	L	V	V	I	H	T	G	.	.	.	P	G	A	A	Q	L	I	A	R	M	L	D	S	L	G	K	S	E	G	I	L	G	V	V	A	G	D	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T	T			T	G	G	G								S	S							S	.	.	.	T	T														G	G	G	T								S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template SS confidence
													78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions