Job Description P23883 Confidence 100.00% Date Thu Jan 5 11:40:20 GMT 2012 Rank 15 Aligned Residues 467 % Identity 31% Template c3rh9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:succinate-semialdehyde dehydrogenase (nad(p)(+)); PDBTitle: the crystal structure of oxidoreductase from marinobacter aquaeolei Resolution 2.63 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	R	L	F	I	N	G	E	Y	T	A	A	A	E	N	E	T	F	E	T	V	D	P	V	T	Q	A	P	L	A	K	I	A	R	G	K	S	V	D	I	D	R	A	M	S	A	A	R	G	V	F	E	R	G	D	W	S	L	S	S	P	A	K	R	K	A	V	L	N	K	L	A	D	L	M	E	A	H	A
Query Conservation
Alig confidence																																																							.	.
Template Conservation																																																							.	.
Template Sequence		N	L	T	G	Y	I	G	G	R	W	K	D	S	A	G	G	A	T	F	D	V	Y	N	P	A	T	G	S	V	I	A	K	V	P	S	X	P	E	E	D	V	V	A	A	V	E	A	G	Q	S	A	L	R	.	.	L	T	N	P	W	P	I	E	T	R	R	K	W	L	E	D	I	R	D	G	L	K	E	N	R
Template Known Secondary structure				S				T	T							T	T								T	T	T																												.	.	S	S	S																					T
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		E	E	L	A	L	L	E	T	L	D	T	G	K	P	I	R	H	S	L	R	D	D	I	P	G	A	A	R	A	I	R	W	Y	A	E	A	I	D	K	V	Y	G	.	E	V	A	T	T	S	S	H	E	L	A	M	I	V	R	E	P	V	G	V	I	A	A	I	V	P	W	N	F	P	L	L	L	T	C	W	K
Query Conservation																																												.
Alig confidence																				.																								.
Template Conservation																				.
Template Sequence		E	E	I	G	R	I	L	C	X	E	H	G	K	P	W	K	E	A	.	Q	G	E	V	D	Y	A	A	G	F	F	D	Y	C	A	K	H	I	S	A	L	D	S	H	T	I	P	E	K	P	K	D	C	T	W	T	V	H	Y	R	P	V	G	V	T	G	L	I	V	P	W	N	F	P	I	G	X	I	A	K	K
Template Known Secondary structure																				.																		G	G	G	G						S			G	G	G												S							S	S	S	T	T
Template Predicted Secondary structure																				.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	P	A	L	A	A	G	N	S	V	I	L	K	P	S	E	K	S	P	L	S	A	I	R	L	A	G	L	A	K	E	A	G	L	P	D	G	V	L	N	V	V	T	G	F	G	H	E	A	G	Q	A	L	S	R	H	N	D	I	D	A	I	A	F	T	G	S	T	R	T	G	K	Q	L	L	K	D	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	A	A	L	A	A	G	C	P	S	V	I	K	P	A	S	E	T	P	L	T	X	I	A	F	F	S	V	X	D	K	L	D	L	P	D	G	X	V	N	L	V	X	G	K	A	S	V	I	G	K	V	L	C	E	H	K	D	V	P	X	L	S	F	T	G	S	T	E	V	G	R	K	L	I	V	D	T	A
Template Known Secondary structure									T									T	T	S												T	T	T	T			T	T	S						S													T	T								S												T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	N	M	K	R	V	W	L	E	A	G	G	K	S	A	N	I	V	F	A	D	C	P	D	L	Q	Q	A	A	S	A	T	A	A	G	I	F	Y	N	Q	G	Q	V	C	I	A	G	T	R	L	L	L	E	E	S	I	A	D	E	F	L	A	L	L	K	Q	Q	A	Q	N	W	Q	P	G	H	P	L	D	P
Query Conservation
Alig confidence		.																						.
Template Conservation		.																						.
Template Sequence		.	E	Q	V	K	K	L	A	L	E	L	G	G	N	A	P	F	I	V	F	D	D	.	A	D	L	E	A	A	A	D	N	L	I	A	N	K	F	R	G	G	G	Q	T	C	V	C	A	N	R	I	F	V	H	E	K	V	A	D	A	F	G	Q	K	L	A	E	R	V	N	K	X	T	V	G	D	G	X	N	D
Template Known Secondary structure		.	T	T	T																	T	T	.	S															G	G	G	G		S	S	S	S								T	T	T																	B	S		T	T	S	T
Template Predicted Secondary structure		.																						.
Template SS confidence
			246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.				.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		A	T	T	M	G	T	L	I	D	C	A	H	A	D	S	V	H	S	F	I	R	E	G	E	S	K	G	Q	L	L	L	D	G	R	N	A	.	.	.	G	L	A	A	A	I	G	P	T	I	F	V	D	V	D	P	N	A	S	L	S	R	E	E	I	F	G	P	V	L	V	V	T	R	F	T	S	E	E	Q	A
Query Conservation																																						.	.	.
Alig confidence																																						.	.	.
Template Conservation
Template Sequence		G	I	D	I	G	P	L	I	N	K	Q	G	F	D	K	V	K	R	H	L	Q	D	A	L	D	K	G	A	S	L	V	A	G	K	Q	P	A	E	L	G	D	G	L	F	F	P	P	T	V	V	Q	G	V	D	R	E	X	C	C	Y	Q	E	E	T	F	G	P	L	V	P	X	A	L	F	R	T	E	E	E	V
Template Known Secondary structure		T		S	B				S																		T	T						S			G	G	G			S	S	S												T	T	S					S				S	S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	L	A	N	D	S	Q	Y	G	L	G	A	A	V	W	T	R	D	L	S	R	A	H	R	M	S	R	R	L	K	A	G	S	V	F	V	N	N	Y	N	D	G	D	M	T	V	P	F	G	G	Y	K	Q	S	G	N	G	R	D	K	S	L	H	A	L	E	K	F	T	E	L	K	T	I	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	A	G	N	D	T	E	F	G	L	A	S	Y	V	F	T	A	D	A	E	R	A	Q	R	V	A	A	G	L	R	F	G	H	V	G	W	N	T	G	T	G	P	T	P	E	A	P	F	G	G	X	K	A	S	G	I	G	R	E	G	G	L	E	G	L	F	E	F	V	E	A	Q	T	V	P
Template Known Secondary structure						T		S	S			S							S															S					S							T	T	S		B			S	G	G	G			S		B	S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.