Return to main results Retrieve Phyre Job Id

Job DescriptionP23883
Confidence100.00%DateThu Jan 5 11:40:20 GMT 2012
Rank40Aligned Residues423
% Identity28%Templatec3lnsD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:benzaldehyde dehydrogenase; PDBTitle: benzaldehyde dehydrogenase, a class 3 aldehyde dehydrogenase, with2 bound nadp+ and benzoate adduct
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110.........120.........130...
Predicted Secondary structure 












Query SS confidence 















































































Query Sequence  GKSVDIDRAMSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAE
Query Conservation 
   

  

  
  
     
       
   
   
  
      

     
 

    
   

      
     
Alig confidence 

















..



























































Template Conservation   
   
  
   
  
  .. 
       
   
      
      
      
 

    
   

      
     
Template Sequence  LSPAKIDSLFSAQKAYFA. . TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALA
Template Known Secondary structure 

..TTTT
STT


T
Template Predicted Secondary structure 

..






Template SS confidence 















































































   4.....10.........20. ........30.........40.........50.........60.........70.........80.
 
   134.....140. ........150.........160.........170.........180.........190.........200.........
Predicted Secondary structure 


....


























Query SS confidence 







. . . .



































































Query Sequence  AIDKVYGE. . . . VATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKE
Query Conservation          ....               
 


  
 
 
 
          

 


 

 


         
 
    
Alig confidence 







....



































































Template Conservation                             
 


  
 
 
 
          

 


 




      
   
   
  
Template Sequence  HLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAE
Template Known Secondary structure  TS



GGG
S




SSSTTTT


TT
Template Predicted Secondary structure 



























Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   210.........220.........230.........240.........250.........260.........270.........280.........
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  AGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASA
Query Conservation 



 


 

 
        
     
  
 



   
  
   
         




 
  

    

 
 
   
Alig confidence 












..










.




















.




















.








Template Conservation 
  
  
  
   ..      
    .   
 



   
  
     .        
 

    

  
.


  

  
Template Sequence  AFAPEYVAVIQGG. . RDENSHLLSLP. FDFIFFTGSPNVGKVVMQAAA. KHLTPVVLELGGKCPLIVLPD. ADLDQTVNQ
Template Known Secondary structure 

TTT



..TS
.
SS
.TTT






TT.

Template Predicted Secondary structure 







..


.



.











.

Template SS confidence 















































































   162.......170.... .....180..... ....190.........200...... ...210.........220....... ..230......
 
   290.........300.........310.........320.........330.........340.........350.........360.........
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  TAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLD
Query Conservation 

       

 
 
   
 
   
 
 
   
         
 
 
     



           
  
   

 
  
Alig confidence 










.




























.....
























..






Template Conservation 
          .  
   
 
   
 
 
   
        .....      

                 .. 
     
Template Sequence  LMFGKFINSGQ. TIAPDYLYVHYSVKDALLERLVERVKTEL. . . . . PEINSTGKLVTERQVQRLVSLLEAT. . QGQVLVG
Template Known Secondary structure  GGGG
.


GGG
.....
STTTT


SS
..
S
Template Predicted Secondary structure 


.






.....







..


Template SS confidence 















































































   237..240....... ..250.........260.........270...... ...280.........290.........300. .......
 
   370.........380.........390.........400.........410.........420 .........430.........440........
Predicted Secondary structure 























.











Query SS confidence 


















































.



























Query Sequence  GRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLAND. SQYGLGAAVWTRDLSRAHRMSRRLKAGS
Query Conservation 
     
    



  
        

 




 
      



   
 .   

 


 
 
          
  
 
Alig confidence 


















































.



























Template Conservation             



     
      
 
 


 
       


   
      
   
 
 
   
      
  
 
Template Sequence  SQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGD
Template Known Secondary structure 

GGGT

S

TTSGGGSS


SSS
S
S
S
S
TS

S
Template Predicted Secondary structure 

































Template SS confidence 















































































   310.........320.........330.........340.........350.........360.........370.........380.........
 
   449450........ .460.........470.........480.........490.
Predicted Secondary structure 






..



















Query SS confidence 









. .
































Query Sequence  VFVNNYNDGD. . MTVPFGGYKQSGNGRDKSLHALEKFTELKTIWI
Query Conservation 
 

      ..   



 
 

 
   
   
  
   
 
  
Alig confidence 









..
































Template Conservation 
 

           



   

 
   
   
      
 
  
Template Sequence  AQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI
Template Known Secondary structure  S

SGGGG
TTS
B


GGG

BST
Template Predicted Secondary structure 




























Template SS confidence 












































   390.........400.........410.........420.........430....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions