Job Description P23883 Confidence 100.00% Date Thu Jan 5 11:40:20 GMT 2012 Rank 41 Aligned Residues 411 % Identity 17% Template c3k9dD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of probable aldehyde dehydrogenase from listeria2 monocytogenes egd-e Resolution 2.00 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	D	I	D	R	A	M	S	A	A	R	G	V	F	E	R	G	D	W	S	L	S	S	P	A	K	R	K	A	V	L	N	K	L	A	D	L	M	E	A	H	A	E	E	L	A	L	L	E	T	L	D	T	G	K	P	I	R	H	S	L	R	D	D	I	P	G	A	A	R	A	I	R	W	Y	A	E	A
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		S	I	Q	E	V	R	N	L	I	E	S	A	N	K	A	Q	K	.	.	E	L	A	A	M	S	Q	Q	Q	I	D	T	I	V	K	A	I	A	D	A	G	Y	G	A	R	E	K	L	A	K	M	A	H	E	E	T	G	F	G	I	W	Q	D	K	V	I	K	N	V	F	A	S	K	H	V	Y	N	Y	I	K	D
Template Known Secondary structure																			.	.			S	S																				T															S																					T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210
Predicted Secondary structure																																																																										.	.	.	.
Query SS confidence																																																																										.	.	.	.
Query Sequence		I	D	K	V	Y	G	E	V	A	T	T	S	S	H	E	L	A	M	I	V	R	E	P	V	G	V	I	A	A	I	V	P	W	N	F	P	L	L	L	T	C	W	K	L	G	P	A	L	A	A	G	N	S	V	I	L	K	P	S	E	K	S	P	L	S	A	I	R	L	A	G	L	.	.	.	.	A	K	E	A
Query Conservation																																																																										.	.	.	.
Alig confidence							.	.																																																																		.	.	.	.
Template Conservation							.	.
Template Sequence		M	K	T	I	G	.	.	M	L	K	E	D	N	E	K	K	V	M	E	V	A	V	P	L	G	V	V	A	G	L	I	P	S	T	N	P	T	S	T	V	I	Y	K	T	L	I	S	I	K	A	G	N	S	I	V	F	S	P	H	P	N	A	L	K	A	I	L	E	T	V	R	I	I	S	E	A	A	E	K	A
Template Known Secondary structure					S		.	.						T	T	T	T																	S	S	S															T	T									G	G	G
Template Predicted Secondary structure							.	.
Template SS confidence
		88	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		G	L	P	D	G	V	L	N	V	V	T	G	F	G	H	E	A	G	Q	A	L	S	R	H	N	D	I	D	A	I	A	F	T	G	S	T	R	T	G	K	Q	L	L	K	D	A	G	D	S	N	M	K	R	V	W	L	E	A	G	.	G	K	S	A	N	I	V	F	A	D	C	P	D	L	Q	Q	A	A	S	A
Query Conservation																																																													.
Alig confidence																																														.	.	.	.	.	.										.											.
Template Conservation																																														.	.	.	.	.	.																					.
Template Sequence		G	C	P	K	G	A	I	S	C	M	T	V	P	T	I	Q	G	T	D	Q	L	M	K	H	K	D	T	A	V	I	L	A	T	G	G	S	A	M	V	K	A	A	Y	S	.	.	.	.	.	.	S	G	T	P	A	I	G	V	G	P	G	N	G	P	A	F	I	E	R	S	.	A	N	I	P	R	A	V	K	H
Template Known Secondary structure		T			T	T	S					S	S													T	T								S										T	.	.	.	.	.	.	S	S	S					B											T	T	.	S
Template Predicted Secondary structure																																														.	.	.	.	.	.																					.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.									.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.
Query Sequence		T	A	A	G	I	F	Y	N	Q	G	Q	V	C	I	A	G	T	R	L	L	L	E	E	S	I	A	D	E	F	L	A	L	L	K	Q	Q	A	Q	N	W	Q	P	G	H	P	.	.	.	.	.	.	.	.	L	D	P	A	T	T	M	G	T	L	I	D	C	A	H	A	D	S	V	H	S	F	I	R	E	G	E
Query Conservation																																															.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	D	S	K	T	F	D	N	G	T	I	C	A	S	E	Q	S	V	V	V	E	R	V	N	K	E	A	V	I	A	E	F	R	K	Q	G	A	H	F	L	S	D	A	E	A	V	Q	L	G	K	F	I	L	R	P	N	G	S	M	N	P	A	I	V	G	K	S	V	Q	H	I	A	N	L	A	G	L	T	V
Template Known Secondary structure							T	G	G	G	G	T	S	T	T	S								T	T	T											T	T																	B		T	T	S		B		T	T	T	T	T											T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.					.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		S	K	G	Q	L	L	L	D	G	R	N	A	G	L	A	A	A	I	G	P	T	I	F	V	D	V	D	P	N	A	S	L	S	R	E	E	I	F	G	P	V	L	V	V	T	R	F	T	S	E	E	Q	A	L	Q	L	A	N	D	S	Q	Y	.	.	.	.	G	L	G	A	A	V	W	T	R	D	L	S	R	A
Query Conservation																																																																.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.												.	.	.																																			.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		P	A	D	A	.	.	.	.	.	.	.	.	.	.	R	V	L	I	A	E	E	T	K	V	G	.	.	.	A	K	I	P	Y	S	R	E	K	L	A	P	I	L	A	F	Y	T	A	E	T	W	Q	E	A	C	E	L	S	M	D	I	L	Y	H	E	G	A	G	H	T	L	I	I	H	S	E	D	K	E	I	I
Template Known Secondary structure			T	T		.	.	.	.	.	.	.	.	.	.											S	.	.	.	S	S		T	T	T	S				S	S								S	S													T	T	T	T	T	T	S							S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		319	320	.	.											.	.	.	.	.	.	.	330	.	.	.				.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.			470	.	.	.	.	.	.	.	.						.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.												.	.										.	.	.	.	.
Query SS confidence																							.												.	.										.	.	.	.	.
Query Sequence		H	R	M	S	R	R	L	K	A	G	S	V	F	V	N	N	Y	N	D	G	D	.	M	T	V	P	F	G	G	Y	K	Q	S	.	.	G	N	G	R	D	K	S	L	H	.	.	.	.	.	A	L	E	K	F	T	E	L	K	T	I
Query Conservation																							.												.	.										.	.	.	.	.
Alig confidence																							.												.	.										.	.	.	.	.
Template Conservation
Template Sequence		R	E	F	A	L	K	K	P	V	S	R	L	L	V	N	T	P	G	A	L	G	G	I	G	A	T	T	N	L	V	P	A	L	T	L	G	C	G	A	V	G	G	S	S	S	S	D	N	I	G	P	E	N	L	F	N	I	R	R	I
Template Known Secondary structure									S		S					S	S							T	T	S	S	S	S	S				S		B	B		T	G	G	G	T		S			S	B			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.