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Job DescriptionP23883
Confidence100.00%DateThu Jan 5 11:40:20 GMT 2012
Rank20Aligned Residues472
% Identity36%Templatec3jz4C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:succinate-semialdehyde dehydrogenase [nadp+]; PDBTitle: crystal structure of e. coli nadp dependent enzyme
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   17..20.........30.........40.........50.........60.........70.........80.........90......
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Query Sequence  AIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAMSAARGVFERGDWSLSSPAKRKAVLNKLADLMEA
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Template Sequence  LFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP. . AWRALTAKERATILRNWFNLMME
Template Known Secondary structure  G


STT

TT


TTT


B
..TS
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   7..10.........20.........30.........40.........50.........60. ........70.........80....
 
   97..100.........110.........120.........130.........140. ........150.........160.........170.....
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Query Sequence  HAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGE. VATTSSHELAMIVREPVGVIAAIVPWNFPLLLTC
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Template Sequence  HQDDLARLMTLEQGKPLAEA. KGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMIT
Template Known Secondary structure  T


.GGG




SSTT



SSSTT
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   85....90.........100.... .....110.........120.........130.........140.........150.........160...
 
   176...180.........190.........200.........210.........220.........230.........240.........250.....
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Query Sequence  WKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKD
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Template Sequence  RKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQ
Template Known Secondary structure  T


TTST

TTT

B

TTS
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   256...260.........270.........280.........290.........300.........310.........320.........330.....
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Query Sequence  AGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPL
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Template Sequence  CA. KDIKKVSLELGGNAPFIVFDD. ADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGL
Template Known Secondary structure  T.TTT





TT.S
GGGG
STTSGGGTT

BS
TT
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   244. ....250.........260...... ...270.........280.........290.........300.........310.........320.
 
   336...340.........350.........360.........370. ........380.........390.........400.........410...
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Query Sequence  DPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGR. . NAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQ
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Template Sequence  DNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEAD
Template Known Secondary structure  STT

B


SSTT


SB
TT
TT
B

S

TTSS


SS

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   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   414.....420.........430.........440.........450.........460.........470.........480.........490...
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Query Sequence  ALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISL
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Template Sequence  VIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL
Template Known Secondary structure 
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S





SS
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SSS
B

SGGGS
BSTT
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   402.......410.........420.........430.........440.........450.........460.........470.........480.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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